Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1087 ATGGACCCGGCCCGGCCCACGGTCGTCACAGAGAAAGTCTGCAAAACGGTGCGTTTGCTAACCTTCTTTATACAAAACGGCGTCGCCAAAAGCAAAGTGGTGCACGACATGCTAGACGTGATGAAGCGAGGGAAGAACATAGGGAAGGCTTTGAACAACGTCATGGTGCGGCACCACGAGGCCATCACGTGTCGCTCACGTGATGCCCACATGTCGTTCGTGTCCCCGTTGGAGTACCAGTTCAGCTGCAGCGGCAGTCCTCCGCGCCCCTCCTACGCCTCCCGGAGGAAGCTCTCTCCGGCCACCGCTCAACGACACAGAGCGCCCAGGCTGTGTCGCGGAGCCGGAGATGACGAGCTGACGGGGACAATACAGAGGCGCGTGAAGATCACGGGCTCCGCTGCATCGATGTTGAAGGAGACGGAGAAGGATTTCCACGTGGATGAGGCGGCGGAGGAGTTCATAGCGAGGTTCTACAGAGATTTGAGGTTGCAGAAATGGTTAGATCATTATTGCTGA 519 0.5742 MDPARPTVVTEKVCKTVRLLTFFIQNGVAKSKVVHDMLDVMKRGKNIGKALNNVMVRHHEAITCRSRDAHMSFVSPLEYQFSCSGSPPRPSYASRRKLSPATAQRHRAPRLCRGAGDDELTGTIQRRVKITGSAASMLKETEKDFHVDEAAEEFIARFYRDLRLQKWLDHYC* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1087 172 Pfam Cotton fibre expressed protein 146 166 IPR008480 -
Apr5g1087 172 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 171 - -
Apr5g1087 172 MobiDBLite consensus disorder prediction 85 108 - -
Apr5g1087 172 PANTHER DUF761 DOMAIN PROTEIN 1 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1087 Apr-Chr5 15514462 15514980 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1087 - - gmx:102661306 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1087 5 15514462 15514980 Apr5g1087 5 15514462 15514980 ECH
Apr2g1385 2 19961992 19962814 Apr5g1087 5 15514462 15514980 ECH
Apr2g2477 2 29197483 29198085 Apr5g1087 5 15514462 15514980 ECH