Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0200 ATGCAGAAGGCACAAGTTCCACATTCCCATGACTTTGCCCTGAAGGAGACCTCACCCAACATAGGGGCAGCTTCAGTCATACGGGACAAGCTATCTTCCACCTATGATCTGGTTGAACAAATGCACTACCTCTATGTTCGTGTGGTGAAAGCCAAGGATTTACCTGCAAAAGATGTCACTGGTAGTCTTGATCCATATGTTGAAGTGAAGCTTGGAAACTACAAGGGACTCACAAAGCATTTTGAGAAGAAGTCCAATCCTGAGTGGAATCAGGTATTTGCCTTCTCCAAAGATAGGATTCAAGCTTCAGTTTTGGAGGTAGTTGTTAAGGATAAGGATGTTATTGCTGATGATTTTGTGGGGAGGGTGTGGTTTGATCTCAATGAGATCCCAAAACGTGTTCCCCCAGATAGCCCTTTGGCTCCACAATGGTATAGGCTTGAAGATCGCAAAGGTGAAAAGGTCAAGGGAGAGTTGATGTTGGCAGTTTGGATGGGAACTCAAGCAGATGAGGCATTTCCTGATTCTTGGCATTCTGATGCAGCACTGGTTGGTTCTGAAGGGGTTGCAAACATTAGATCAAAAGTGTACCTTTCTCCTAAGCTTTGGTATCTAAGGGTCAATGTAATTGAAGCCCAGGACTTGATGCCAAGTGATAAAACAAGGTATCCTGAAGTTTTTGTGAAGGTTAGTCTTGGGAATCAGTTTTTAAGAACTAGAGTGTCGCAAAGTAAAACCATAAATCCTATGTGGAATGAGGACTTGATGTTTGTTGCTGCTGAGCCATTTGAGGAACCCTTAGTTTTGTCTGTTGAAGACAGGGTTGGACCAAACAAAGATGAAGTCTTGGGAAGGTGCATGATCCCTTTACAGATTGTGCAAAGGAGGTTGGACCATAAGCTTGTGAACACTAGGTGGTTTAATCTTGAGAAGCACGTGGTTGTGGAAGGGGAGAAGAAGGAATCCAAATTTGCAAGCAGGATACATTTGAGGGTGTGTTTGGATGGTGGGTACCATGTTTTGGATGAGTCAACTCATTACAGTAGTGATCTTAGGCCAACAGCTAAACAATTATGGAAGCCCAGCATTGGAATTCTAGAAGTGGGAATTATAAGTGCACAAGGGTTGATCCCAATGAAGACAAGAGATGGTAGAGGAACAACAGATGCTTATTGTGTAGCCAAATATGGGCAAAAATGGATCCGTACTAGGACCATTGTAGATAGCTTTACTCCAAAATGGAATGAACAGTACACTTGGGAAGTGTTTGATCCATGTACTGTTATTACAGTTGGGGTCTTTGATAATGGTCATTTACAAGGAGGAGACAAAACAGGTGGATCAAAGGATTCTAGGATAGGGAAGGTGAGAATTAGGCTATCCACTCTTGAAGCTGATAAGGTTTACACACATTCATATCCTCTTTTAGCACTGCATACTTCAGGCGTGAAGAAAACTGGAGAAGTGCAATTGGCAGTGAGGTTCACAAGATCATCTTTTATCAATATGTTGTACATGTATTCCCAACCGTTGTTGCCAAAGATGCACTACATCCATCCTCTATCTGTGATTCAGCTAGATAGTCTGAGGCATCAGGCTATGCAGATTGTATCAATGAGGTTGAGCAGGGCTGAGCCACCACTGAGGAAAGAGGTTGTGGAATACATGCTTGATGTGGATTCACACATGTGGAGTATGAGAAGGAGCAAAGCTAATTTCTTCAGAATAATGAAAGTTCTTGGTGGTTTGATAGCCTTTGGGAGGTGGTTTGATCAGATATGCAACTGGAAAAACCCAATCACCACCATACTAATTCACATTCTTTTCATAATATTGGCACTTTACCCTGAGCTAATACTTCCCACAATCTTCTTGTACATGTTTTTGATTGGAATTTGGAACTTCAGATGGAGGCCAAGGCACCCTCCATATATGGACACTAGACTTTCTCATGCTGATGCTTCTCATCCTGATGAATTGGATGAAGAGTTTGATTCATTCCCAACTTCCAAGTCATCAGATATTGTTAGGATGAGATATGATCGTTTAAGAAGTATTGCAGGGAGAGTACAAACTGTTGTAGGTGACTTTGCTACCCAAGGAGAAAGGTTCCAAAGTCTTCTAAGCTGGAGAGATCCAAGGGCTACAACACTCTTTGTTACATTCTGCTTCTTTGCAGCTATAGTTCTCTATGTTACTCCCTTTCAGGTTGTGTCCCTTCTCATTGGCTTCTATGTGCTAAGGCACCCCAGATTCCGCCAGAAACTTCCTTCAGTGCCACTCAACTTCTTTAGGAGGTTGCCTGCTAGATCAGACACCATGTTGTAA 2328 0.4248 MQKAQVPHSHDFALKETSPNIGAASVIRDKLSSTYDLVEQMHYLYVRVVKAKDLPAKDVTGSLDPYVEVKLGNYKGLTKHFEKKSNPEWNQVFAFSKDRIQASVLEVVVKDKDVIADDFVGRVWFDLNEIPKRVPPDSPLAPQWYRLEDRKGEKVKGELMLAVWMGTQADEAFPDSWHSDAALVGSEGVANIRSKVYLSPKLWYLRVNVIEAQDLMPSDKTRYPEVFVKVSLGNQFLRTRVSQSKTINPMWNEDLMFVAAEPFEEPLVLSVEDRVGPNKDEVLGRCMIPLQIVQRRLDHKLVNTRWFNLEKHVVVEGEKKESKFASRIHLRVCLDGGYHVLDESTHYSSDLRPTAKQLWKPSIGILEVGIISAQGLIPMKTRDGRGTTDAYCVAKYGQKWIRTRTIVDSFTPKWNEQYTWEVFDPCTVITVGVFDNGHLQGGDKTGGSKDSRIGKVRIRLSTLEADKVYTHSYPLLALHTSGVKKTGEVQLAVRFTRSSFINMLYMYSQPLLPKMHYIHPLSVIQLDSLRHQAMQIVSMRLSRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMKVLGGLIAFGRWFDQICNWKNPITTILIHILFIILALYPELILPTIFLYMFLIGIWNFRWRPRHPPYMDTRLSHADASHPDELDEEFDSFPTSKSSDIVRMRYDRLRSIAGRVQTVVGDFATQGERFQSLLSWRDPRATTLFVTFCFFAAIVLYVTPFQVVSLLIGFYVLRHPRFRQKLPSVPLNFFRRLPARSDTML* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0200 775 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN 7 775 - -
Apr5g0200 775 CDD C2C_MCTP_PRT_plant 204 353 - -
Apr5g0200 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 203 355 IPR035892 -
Apr5g0200 775 Gene3D C2 domain 190 334 IPR035892 -
Apr5g0200 775 Gene3D C2 domain 348 497 IPR035892 -
Apr5g0200 775 Pfam C2 domain 203 309 IPR000008 -
Apr5g0200 775 Pfam C2 domain 43 136 IPR000008 -
Apr5g0200 775 Pfam C2 domain 364 475 IPR000008 -
Apr5g0200 775 ProSiteProfiles C2 domain profile. 186 307 IPR000008 -
Apr5g0200 775 ProSiteProfiles C2 domain profile. 25 145 IPR000008 -
Apr5g0200 775 Gene3D C2 domain 42 164 IPR035892 -
Apr5g0200 775 ProSiteProfiles C2 domain profile. 347 473 IPR000008 -
Apr5g0200 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 43 181 IPR035892 -
Apr5g0200 775 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 7 775 - -
Apr5g0200 775 CDD C2B_MCTP_PRT_plant 43 167 - -
Apr5g0200 775 Pfam Plant phosphoribosyltransferase C-terminal 620 775 IPR013583 -
Apr5g0200 775 CDD C2D_MCTP_PRT_plant 365 492 - -
Apr5g0200 775 SMART C2_3c 365 472 IPR000008 -
Apr5g0200 775 SMART C2_3c 43 139 IPR000008 -
Apr5g0200 775 SMART C2_3c 204 302 IPR000008 -
Apr5g0200 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 364 499 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0200 Apr-Chr5 1812056 1814383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0200 5 775 Lipid Metabolism Gene Families AT3G57880 82.513 0.0 1369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0200 - - gmx:100788273 1446.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2362 2 28406137 28409286 Apr5g0200 5 1812056 1814383 PCT