Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2362 ATGCAGAAGCCACTAGAGCCCCTAGATTTTGCTCTCAAGGAGACCTCACCCAACATTGGAGCAGGTGCAGTCGCAAGGAACAAGCTCTCCTGCACCTATGACCTGGTTGAACAAATGCAATACCTCTATGTTCGAGTGGTTAAAGCCAAGGATTTACCTGGGAAGGATGTTACTGGAAGTGTTGATCCCTATGTTGAAGTGAAGCTTGGAAATTACAAGGGCCTTACCAAGCACTTCCAGAAAAAGTCAAACCCTGAATGGAATCAGGTTTTTGCCTTCTCCAAAGAGAGAGTTCAAGCTTCTGTTTTGGAGGTGGTGATCAAAGACAAGGATGTTCTTGTGGACGACTTGGTAGGCAGAGTGCTGTTTGATCTCAATGAAATTCCGAAACGCGTGCCGCCGGATAGCCCATTGGCTCCACAATGGTATAGGTTGGAAGATAGGAGAGGTGACAAAGCCAAGGGAGAGCTAATGCTGGCAGTTTGGATGGGAACTCAAGCAGATGAGGCATTTCCTGATGCATGGCATTCTGATGCAGCAAGTGTTGGTCCTGAAGCAGTTGCAAACATAAGATCAAAGGTTTACCTTTCACCCAAGCTTTGGTATGTCAGGGTCAATGTTATTGAAGCTCAGGACTTGATACCAAATGATAAAAGCCGGTATCCTGAAGTCTTTGTGAAAGCTAATCTGGGGAGTCAGTTTTTACGAACTAGAATATCCCCAAGTAAAACCATAAATCCCATGTGGAATGAGGACTTGATGTTTGTTGCTGCTGAGCCATTTGAGGAAGCCCTGGTTCTGACTGCAGAAGACAGGGTTGGACCAAACAAAGATGAAATCCTAGGAAAGTGTGTGATTCCTTTACAGAATGTGCAAAGGAGGTTGGACCATAAGCCTGTGAACGCAAGGTGGTTTAATCTTGAAAAGCATGTGGTTGTTGAAGGGGAACAGAAGAAAGAAACCAAGTTCTCAAGTAGGATACATTTGAGGATTTGCTTGGAAGGTGGCTACCATGTGTTGGATGAATCAACACACTACAGTAGTGATCTTAGGCCAACTGCAAAACAACTGTGGAAGCCCAGCATTGGAATTCTGGAAGTGGGGATTATAAGCGCACAAGGGCTAATCGCAATGAAGACAAGAGATGGTAGAGGAACCACAGATGCATATTGTGTAGCTAAATATGGGCAGAAGTGGATCCGTACTAGGACAATTGTAGATAGTCTTGTTCCAAGGTGGAATGAGCAATACATTTGGGAGGTTTTTGATCCATGTACTGTTATTACAGTAGGGGTTTTTGACAATGGTCATTTACAAGGGGGAGACAAATCAGATGGATCAAAGGATTCAAGAATAGGGAAGGTGAGAATTAGGCTATCCACTCTTGAAGCTGATAGGGTGTACACACACTCCTATCCTCTTTTAGTACTGCAGAATTCAGGTATGAAGAAAATGGGAGAAGTGCAATTGGCTGTGAGGTTCACAAGCTTATCTTTGATAAATATGTTATCTACATATTCACAGCCATTGTTGCCAAAGATGCACTACATCCATCCTCTATCAGTGATTCAGCTAGACAGTCTTAGACATCAGGCTATGCAGACTGTGTCAATAAGGTTGAGCAGGGCTGAGCCACCACTAAGGAAAGAAGTGGTGGAATACATGCTAGATGTGGACTCACATATGTGGAGTATGAGAAGGAGCAAAGCTAATTTCTTCAGAATAATGAAAGTCCTAGGTGGGTTGATAGCCATTGGAAAGTGGTTTGATCAGATTTGCAATTGGAAAAACCCTCTCACAACCATACTCATTCATATCCTTTTCATAATATTGGTTCTTTATCCAGAGCTTATACTTCCCACAATTTTCCTTTATCTATTTCTCATTGGAATTTGGAACTTTAGATGGAGGCCAAGACACCCTCCTCATATGGACACACGACTATCACATGCTGATGCTGCTCATCCTGATGAATTGGATGAAGAGTTTGATACATTCCCAACTTCGCGATCACCAGATATTGTTAGGATGAGGTATGATCGTTTAAGAAGCATTGCAGGAAGGGTCCAAACAGTTGTAGGTGATCTTGCCACTCAAGGAGAAAGGTTCCACAATCTGCTAAGTTGGAGAGACACAAGGGCTACCACTCTCTTTGTGACATTCTGTTTCATTACTTCTGTAGTTCTCTATGTCACTCCCTTCCAAGTTGTGTCCCTTCTCATTGGCTTCTATGTGCTAAGGCATCCCAGATTCCGCCAGAAATTTCCATCAGTCCCATTCAACTACTTCAGGAGATTGCCTGCTAGAGTAGACACCATGTTGTAA 2325 0.4331 MQKPLEPLDFALKETSPNIGAGAVARNKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSVDPYVEVKLGNYKGLTKHFQKKSNPEWNQVFAFSKERVQASVLEVVIKDKDVLVDDLVGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRRGDKAKGELMLAVWMGTQADEAFPDAWHSDAASVGPEAVANIRSKVYLSPKLWYVRVNVIEAQDLIPNDKSRYPEVFVKANLGSQFLRTRISPSKTINPMWNEDLMFVAAEPFEEALVLTAEDRVGPNKDEILGKCVIPLQNVQRRLDHKPVNARWFNLEKHVVVEGEQKKETKFSSRIHLRICLEGGYHVLDESTHYSSDLRPTAKQLWKPSIGILEVGIISAQGLIAMKTRDGRGTTDAYCVAKYGQKWIRTRTIVDSLVPRWNEQYIWEVFDPCTVITVGVFDNGHLQGGDKSDGSKDSRIGKVRIRLSTLEADRVYTHSYPLLVLQNSGMKKMGEVQLAVRFTSLSLINMLSTYSQPLLPKMHYIHPLSVIQLDSLRHQAMQTVSIRLSRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMKVLGGLIAIGKWFDQICNWKNPLTTILIHILFIILVLYPELILPTIFLYLFLIGIWNFRWRPRHPPHMDTRLSHADAAHPDELDEEFDTFPTSRSPDIVRMRYDRLRSIAGRVQTVVGDLATQGERFHNLLSWRDTRATTLFVTFCFITSVVLYVTPFQVVSLLIGFYVLRHPRFRQKFPSVPFNYFRRLPARVDTML* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2362 774 Pfam Plant phosphoribosyltransferase C-terminal 619 774 IPR013583 -
Apr2g2362 774 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 5 774 - -
Apr2g2362 774 CDD C2B_MCTP_PRT_plant 41 165 - -
Apr2g2362 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 41 178 IPR035892 -
Apr2g2362 774 ProSiteProfiles C2 domain profile. 181 305 IPR000008 -
Apr2g2362 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 354 IPR035892 -
Apr2g2362 774 CDD C2C_MCTP_PRT_plant 202 352 - -
Apr2g2362 774 SMART C2_3c 41 137 IPR000008 -
Apr2g2362 774 SMART C2_3c 364 471 IPR000008 -
Apr2g2362 774 SMART C2_3c 202 300 IPR000008 -
Apr2g2362 774 ProSiteProfiles C2 domain profile. 23 143 IPR000008 -
Apr2g2362 774 Gene3D C2 domain 361 498 IPR035892 -
Apr2g2362 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 363 496 IPR035892 -
Apr2g2362 774 ProSiteProfiles C2 domain profile. 346 472 IPR000008 -
Apr2g2362 774 Gene3D C2 domain 26 163 IPR035892 -
Apr2g2362 774 Gene3D C2 domain 187 333 IPR035892 -
Apr2g2362 774 Pfam C2 domain 363 474 IPR000008 -
Apr2g2362 774 Pfam C2 domain 41 134 IPR000008 -
Apr2g2362 774 Pfam C2 domain 201 307 IPR000008 -
Apr2g2362 774 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN 5 774 - -
Apr2g2362 774 CDD C2D_MCTP_PRT_plant 364 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2362 Apr-Chr2 28406137 28409286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2362 1 774 Lipid Metabolism Gene Families AT3G57880 80.903 0.0 1340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2362 - - gmx:100809753 1432.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2362 2 28406137 28409286 Apr2g2362 2 28406137 28409286 ECH
Apr2g2362 2 28406137 28409286 Apr5g0200 5 1812056 1814383 PCT