Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0188 ATGGGTGGTGCTAGCTTCGTCTTGGCAATGGCATTAGTAATCCTAATGGCTCTAACATCCTCACGAGTAGAGTCATGTCCTCCCTCCGAATGGGCATCACTCATGGCCTTTAAGGCAGCACTTAAAGAGCCCCATTTAGGAATCTTCCATTCATGGAGTGGTACTAACTGCTGCTACCACTGGTACGGCATCACCTGCGACCCCACCACTGGCCGCGTCGCCGAAATCACCCTACGCGCCCTCACCGTCACCGACGACCACCGCTACAACCGCCGCACCGGAACACCCTACATGAGCGGCCACATTTCTCCCTCAATATGCAACCTCACTCAACTCTCCAGCATCACAATCTCCGATTGGAAGGGCATTTCCGGAAACATCCCTCGCTGCATCACAACGCTCCGTTTTCTTCAAATCATTGACCTCTCCGGGAACCTCATCTCCGGCAAAATTCCGTGGGATATAGGGCGCCTCACCCAACTTACGCTGCTCAACCTCGCAGACAATCACATCTCTGGGAGGATTCCGAGGACGTTGGTGAACCTAACCAACCTCATGCAATTGGACCTTCGCAATAACGCCATCGAGGGCCCAATTCCTTGGGATTTGGGCCGGCTCAAGAGACTGAACCGGGCCTTGCTGAGTCATAACCGGATCACTGGCCGAATCCCACGGTCCATTTCTGAAATTTACGGGTTGGCGGATCTGGACTTGGCTCTAAATCGGTTGTCCGGTTCGATTCCATTTTCTTTGGGCCGAATGAAGGTTCTGGACTCGCTGAATCTGAAGTATAACAACCTAACAGAGAAGATTCCGTGGACTCTATTGGGCTCCAGAATAAGCCATTTGGATTTGAGTTGGAACTGGTTGAGTGGGCCCATTCCCAATGTGTTTGGAGGAAAATCGTATTTTATAAGCCTTGATTTGTCGCATAATAATTTGACAGGTTCAGTAGCTAAATCTATGGTGCATGCTACCTATATCGGACATTTGGACTTGAGTCATAACCGTCTCTGTGGCCCCATTCCACGTGGTGCACCGTTCAACCATCTTCCCCTGAGTTCATTGGATCATAATCTGTGCCTTTGTGGAAAACCGCTTAATCCCTGCACTCATATCCCATGA 1125 0.5049 MGGASFVLAMALVILMALTSSRVESCPPSEWASLMAFKAALKEPHLGIFHSWSGTNCCYHWYGITCDPTTGRVAEITLRALTVTDDHRYNRRTGTPYMSGHISPSICNLTQLSSITISDWKGISGNIPRCITTLRFLQIIDLSGNLISGKIPWDIGRLTQLTLLNLADNHISGRIPRTLVNLTNLMQLDLRNNAIEGPIPWDLGRLKRLNRALLSHNRITGRIPRSISEIYGLADLDLALNRLSGSIPFSLGRMKVLDSLNLKYNNLTEKIPWTLLGSRISHLDLSWNWLSGPIPNVFGGKSYFISLDLSHNNLTGSVAKSMVHATYIGHLDLSHNRLCGPIPRGAPFNHLPLSSLDHNLCLCGKPLNPCTHIP* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0188 374 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 372 - -
Apr5g0188 374 PANTHER RECEPTOR-LIKE PROTEIN 12 ISOFORM X1 2 372 IPR045273 -
Apr5g0188 374 SUPERFAMILY L domain-like 25 370 - -
Apr5g0188 374 Gene3D Ribonuclease Inhibitor 95 373 IPR032675 -
Apr5g0188 374 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Apr5g0188 374 Gene3D Ribonuclease Inhibitor 25 94 IPR032675 -
Apr5g0188 374 Pfam Leucine Rich Repeat 137 157 IPR001611 GO:0005515
Apr5g0188 374 Pfam Leucine Rich Repeat 282 299 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0188 Apr-Chr5 1701725 1702849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0188 98 371 Receptor kinase-like Gene Family AT5G46330 37.143 6.92e-44 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0188 - - lja:Lj3g3v3246320.1 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2350 2 28316072 28317572 Apr5g0188 5 1701725 1702849 PCT