Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2350 ATGGTTGGCGTTAGGTTTATAACAGTCGCGGTGCTATTCCTTGCGCTCACAGCCGGCGTGCGGTCGTGTCCGCCGTCGGACAGGGATGCGCTGCTGGCAATCAAGGCGGCGCTCCACGAACCGTATCTCGGCATCTTCAACTCGTGGACCGGCGCCGATTGCTGCCACAAATGGTACGGCGTTAGCTGCGACCAGGAGACTCGGCGCGTGGCCGACATCAACCTCCGCGGCGAGTCGGAGGAGCCAATATTCCAGAAGGCACATCGCACCGGCTACATGACCGGTTACATCTCGCCGGCGATCTGCAAGCTCGCTCGCCTCTCCAGCATCACCATCGCCGACTGGAAGGGAATCTCCGGCGAGATCCCTCGCTGCATAACCACCCTACCTTTCCTTCGCATCATCGACCTCATCGGAAACCGCATATCCGGCACCATCCCCGCCGACATCGGCAGACTCCGCCGCCTCACAGTCTTCAACATCGCCGACAACGTTATCTCCGGCACGATCCCAGCGTCGCTAACGAACCTCATAAGTCTTATGCACCTGGACCTTCGAAACAACCGAATCTCCGGGCCCATTCCGCATGACTTCGGGAAGCTTAAAATGCTGAGCCGGGCCTTGTTGAGTGGTAACCACCTTAGCGGGCCGATCCCGGACTCAGTTTCTTGGATTTACCGTCTGGCGGATCTGGATCTGTCTCGGAACCAGATCTCTGGGCCCATTCCGGAATCGCTGGGTAAAATGGCTGTTCTGTCAACGCTGAATTTGGACATGAATAAGCTGTCTGGGCCCATTCCGAAAAGCCTATTCGGGTCGGGAATCAGTGACTTGAACTTGAGCCGTAACGGGTTGGAGGGGAACATAGCAGACGCGTTCGGCGTTCGGTCGTATTTCACGGTGCTTGATTTGTCGTATAACAATCTGAAAGGGGCCATACCCAAATCCATATCCTCTGCTTCGTATATTGGGCATTTGGATTTGAGTCACAACCATCTCTGTGGCCCAATTCCGGTTGGGTCACCTTTCGATCATCTCGAAGCGTCGTCGTTTGTGTACAACGATTGCCTCTGCGGGAAACCACTCAAACCTTGCTAG 1098 0.5592 MVGVRFITVAVLFLALTAGVRSCPPSDRDALLAIKAALHEPYLGIFNSWTGADCCHKWYGVSCDQETRRVADINLRGESEEPIFQKAHRTGYMTGYISPAICKLARLSSITIADWKGISGEIPRCITTLPFLRIIDLIGNRISGTIPADIGRLRRLTVFNIADNVISGTIPASLTNLISLMHLDLRNNRISGPIPHDFGKLKMLSRALLSGNHLSGPIPDSVSWIYRLADLDLSRNQISGPIPESLGKMAVLSTLNLDMNKLSGPIPKSLFGSGISDLNLSRNGLEGNIADAFGVRSYFTVLDLSYNNLKGAIPKSISSASYIGHLDLSHNHLCGPIPVGSPFDHLEASSFVYNDCLCGKPLKPC* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2350 365 SUPERFAMILY L domain-like 22 364 - -
Apr2g2350 365 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 7 365 - -
Apr2g2350 365 Pfam Leucine rich repeat 276 333 IPR001611 GO:0005515
Apr2g2350 365 Pfam Leucine rich repeat 154 214 IPR001611 GO:0005515
Apr2g2350 365 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 7 365 - -
Apr2g2350 365 Gene3D Ribonuclease Inhibitor 90 365 IPR032675 -
Apr2g2350 365 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Apr2g2350 365 Gene3D Ribonuclease Inhibitor 20 88 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2350 Apr-Chr2 28316072 28317572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2350 90 365 Receptor kinase-like Gene Family AT4G08850 34.426 2.25e-45 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2350 - - gmx:100804739 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2350 2 28316072 28317572 Apr2g2350 2 28316072 28317572 ECH
Apr2g2350 2 28316072 28317572 Apr5g0188 5 1701725 1702849 PCT