Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0150 ATGCTGGGGTTCACTCTTCCGCTTCAGCTTCAGCTCCGATGCTACCCCCAACCGTACCTTCCCAATTCGATAGCACCCAAACCCTACTATCCACGCCTTCCTTCACTTCCTCGAACTCTGATTTCATCCGGTTGGGTCCGGTTCGGTTTGCGAGCGAGTTTTCAGCCGGTTCGGTCCGGTTCGGTGTTTTCCGAGGATGAGTTTGGCGTGGAGCTTGGGCGGCTGCTGGCGCTGTTGCCGGAGGAGATGCGCCGGCGCGTGAGCGACCACCCGGAGCTGCCGCAGTTGATCGAAGTGGTGATGGATTTGGGGCGGAAACCGCTTGCTAGATTTCCCTCCGGGGATTTCGTGATATCGGAGTATCCTATAACTGTTCAGGATATCGAGCATGCCACTGCTCAGGTTGGTGACTTTGCTGTTGATAATCGAGCAGGAATCAGCAGGACATTGCATCGGATCAGTGCCATCAGAAATCGCAAGGGCACAATTATTGGCCTAACTTGTCGAGTTGGCAGAGCAATTTCAGGAAGTGCTATGTTGTTGCAAGATTTGGTTCAAGATGGAGCTTCTTTGTTGCTTATTGGGCCACCGGGGGTTGGCAAAACTACAATTATTAGGGAAATAGCTAGGATGCTGGCAAATGATTACAAGAAGCGTGTGATGATAGTTGACACCTCCAATGAAATTGGGGGTGATGGTGATATACCTCATGCTGGAATTGGTAATGCTCGACGTATGCAAGTCCCCATCTCTGATATGCAACATAAGGTATTGATAGAGGCAGTTGAAAACCACATGCCTCAAGTAATTGTAATTGATGAAATTGGTACTAAACTTGAAGCAATGGCAGCGACCACAATTGCACAACGTGGGATCCAGCTTGTTGCTACTGCTCATGGAGTCACAATTGAAAATCTGATAATGAATCCTTCATTAGAGATGCTTGTCGGAGGAATACAGAGTGTGACACTTGGGGATGAAGAGGCCAGTCGCAGGGGTGTGCAGAAGACAGTACTGGAGAGGAAAGGCCCATCTACGTTTAGTTGTGGAGTGGAGATTATTTCAAAAACAGAGTTGCGCATTCACCTTAGCCTTGAAGCAACTGTAGATGCTATTCTTTCTGGTCGTTTTCCAAATGTAGAAGTACGCAAGATGAAGTCTCAAGAACAGGAAGAGATTGTACAAAATGGGCCTGTTAGTGAAAGTTCTCTTGAAATAAATGGTGAACTAACGTTTGAAGATGCTACAGAGGATGCTGATGATCAAACCAGCCAAAATGAATCACTTTTGAAGTTGCCTATTGACTTGGTAGAGGATTCCTGGGAGCACAAGTTGCCACTTCACCTGTTTTGTTATGGGATTTTAGAGGCAACTGTTATTCAAGGGATTAAACAGTTGAAAATGAATGATGCGGCCATTCAATTGACTGATAATATTAGTGAAGCAAATGCTTTACTTGCCTTGCAATCCAAGCTTAAAAAGAATCCAGGGATTCAGGCTGCTGCCAAGTCTCATGATATTCCCATTTATGTGACGAAGACGAGTTCATTGGAGCAAGTAACAAAAGCTATACGGGCATTAGTAAGTGATCATGAAGATGGTTTAAAGGATTCTGTATCGACAGACAAGATAAAAGTATCAGAGAAAATTGATGCTTTGGAGGAGGCAAGAATGGCTATAGAACATATATTGATTCCAAAGGGAGAACCTGTGGATCTACTCCCCAGATCACCTTGCATATTATCTTTGCAGCTGGAACTTGTTCGTAAATACCAACTAGAAGCAAGGAGAATCAGTGCAGAGTCAGGTGTATATCTGCGCATACTTCCATCCCATTATGAGACGGATGAAGTAAAAACTTGTGAAACTTCTGAGTCCGATGTTGAATTTGATGATTTTGCCTCTTCTAATGGAAGTGTCAGTGGCTCAGTCAACAGCTTAGATAGATTGCCCCTACTGCCAGAGTAG 1968 0.4507 MLGFTLPLQLQLRCYPQPYLPNSIAPKPYYPRLPSLPRTLISSGWVRFGLRASFQPVRSGSVFSEDEFGVELGRLLALLPEEMRRRVSDHPELPQLIEVVMDLGRKPLARFPSGDFVISEYPITVQDIEHATAQVGDFAVDNRAGISRTLHRISAIRNRKGTIIGLTCRVGRAISGSAMLLQDLVQDGASLLLIGPPGVGKTTIIREIARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPISDMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAATTIAQRGIQLVATAHGVTIENLIMNPSLEMLVGGIQSVTLGDEEASRRGVQKTVLERKGPSTFSCGVEIISKTELRIHLSLEATVDAILSGRFPNVEVRKMKSQEQEEIVQNGPVSESSLEINGELTFEDATEDADDQTSQNESLLKLPIDLVEDSWEHKLPLHLFCYGILEATVIQGIKQLKMNDAAIQLTDNISEANALLALQSKLKKNPGIQAAAKSHDIPIYVTKTSSLEQVTKAIRALVSDHEDGLKDSVSTDKIKVSEKIDALEEARMAIEHILIPKGEPVDLLPRSPCILSLQLELVRKYQLEARRISAESGVYLRILPSHYETDEVKTCETSESDVEFDDFASSNGSVSGSVNSLDRLPLLPE* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0150 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 330 IPR027417 -
Apr5g0150 655 Gene3D - 170 330 IPR027417 -
Apr5g0150 655 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 64 615 - -
Apr5g0150 655 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 195 214 - -
Apr5g0150 655 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 555 573 - -
Apr5g0150 655 CDD AAA 188 277 - -
Apr5g0150 655 PANTHER KINASE-RELATED 64 615 - -
Apr5g0150 655 CDD R3H_AAA 551 610 IPR034081 -
Apr5g0150 655 Pfam Sporulation stage III, protein AA 169 317 IPR045735 -
Apr5g0150 655 SMART AAA_5 187 318 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0150 Apr-Chr5 1309550 1316177 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0150 - - aprc:113864776 1266.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0150 5 1309550 1316177 Apr5g0150 5 1309550 1316177 ECH
Apr5g0150 5 1309550 1316177 Apr2g1878 2 24331478 24332088 PCT