Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0023 ATGCCAACAGCGTCTTCCTCCGATTCCAATGATCGGGAAACAGAATTCCGGTCACCGTTCCTGCCGGCGGCGGAAAAACCTGGTGGAGAATCAGAACCGGAGAAGCTGTGCATCGACGTGATGCTTCAGAACTATTGCGGCGAGTTCGGGCGGTGGCAGTTTAAGCACTTCGTCCTAACGTGCCTCGCTTGGGCTTTGGAAGCGTTCCACACAATGGTTATGATATTCGCCGACCGCGAACCGGAGTGGAGGTGTCTGGATGGCGCGGCCGGTTTGGGTTGCGAACCGGGTGCGACGAGCGTGTGCCGGTTCGAACCGGGTTCGTGGGAGTGGGTGGGAGGGTCGGGTTCTTCCACCGTTGCTGAGTGGGGTTTGGTTTGTGGTGACAAGTTTAAGGTTGGGCTGGTTCAGGCCGTCTTCTTCGGCGGCTGTATGATCGGTGCTGGAATATTTGGGCACCTCTCAGACTCATTTCTTGGAAGAAAAGGTTCTCTCACAGTGGTTTGCATCCTAAACACAATCTTTGGCACCTTAACTGCATTTTCCCCTAACTATTCATCATACCTCATCCTCCGCCTCCTCACCGGTTGCAGCACCGGTGGCGTTGGCCTCTGCGCCTTCGTCCTCGCCACCGAACCCGTAGGCCCCAAATATCGCGGCATCGCCGGCATGTCCACCTTCTACTTCTTCTCATCTGGCATCACACTCCTCTCAGCCATCGCTTACATCTTCCCCACATGGCGCAAACTCTACATAGCTTCTTCCATTCCCTCTCTCCTCTTCCTCATCACCACCCTCCCCTTCATCTCTGAGTCCCCGAGATGGTACCTCATAAGAGGAAGAATCAACGAAGCCATCAAAATCATGTCCACAATCGCCACCACAAACGGTAACCACCTTCCACAACGAGTAATTCTTACCCTCGATGAGGAACCATCGCCGCCACCAATACCAACACCGCCGAATGCCTCGTGCAACGTGGCGAACAAAGACGCGGTGACGGGGTGTCTTATTGACGTTCTTCGCTCGCCGGTGACGCGCACGCGCTTGGTTCTGGCTGTGGTGATTAACTTTTTATGTTCGGTGGTGTACTACGGTTTGAGTTTAAACGTGGTGAACCTCGAAACGAATCTTTATCTCACCGTTATACTAAACGCCGTGGCGGAGATGCCGGCGTTTATGATAACTGCGATGTTGTTGGATAGGTTGGGAAGGAAGCCGTTAACGATAGGGACGTTATGGTGGAGTGGGTTGTTTTGTTTCCTTGGGAGTTTGGTTGGTAACGTTGGGGTGTGGAAAGGTGTCAAAATGATGTGTGGGATTTTGGGGATTTTTGGAATGGCGGGGACTTATAATTTGTTGTTTATTTACACCGCCGAGTTGTTTCCCACGGTGGTGAGGAACGCCGCACTCGGCTGCGCCACCCAAGCGGCGCAAATGGGGGCCATTTTGGCACCGGTTGTTGTCGTTTTGGGTGGCGCGTGGCCGTTTGCGGTGTTCGCTTTGTGTGGAATAAGTGGTGGCCTCTTTGCGTTTTATTTGCCAGAGACACTGAACCAACCTCTCTATGATACGTTGGCGGGATTGGAGGCCAAGGTTAATAACGTTGCCTCCATTATTGTATGA 1626 0.5308 MPTASSSDSNDRETEFRSPFLPAAEKPGGESEPEKLCIDVMLQNYCGEFGRWQFKHFVLTCLAWALEAFHTMVMIFADREPEWRCLDGAAGLGCEPGATSVCRFEPGSWEWVGGSGSSTVAEWGLVCGDKFKVGLVQAVFFGGCMIGAGIFGHLSDSFLGRKGSLTVVCILNTIFGTLTAFSPNYSSYLILRLLTGCSTGGVGLCAFVLATEPVGPKYRGIAGMSTFYFFSSGITLLSAIAYIFPTWRKLYIASSIPSLLFLITTLPFISESPRWYLIRGRINEAIKIMSTIATTNGNHLPQRVILTLDEEPSPPPIPTPPNASCNVANKDAVTGCLIDVLRSPVTRTRLVLAVVINFLCSVVYYGLSLNVVNLETNLYLTVILNAVAEMPAFMITAMLLDRLGRKPLTIGTLWWSGLFCFLGSLVGNVGVWKGVKMMCGILGIFGMAGTYNLLFIYTAELFPTVVRNAALGCATQAAQMGAILAPVVVVLGGAWPFAVFALCGISGGLFAFYLPETLNQPLYDTLAGLEAKVNNVASIIV* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0023 541 Pfam Sugar (and other) transporter 130 523 IPR005828 GO:0016021|GO:0022857|GO:0055085
Apr5g0023 541 ProSiteProfiles Major facilitator superfamily (MFS) profile. 56 519 IPR020846 GO:0022857
Apr5g0023 541 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 39 530 - -
Apr5g0023 541 ProSitePatterns Sugar transport proteins signature 1. 396 412 IPR005829 GO:0016021|GO:0022857|GO:0055085
Apr5g0023 541 MobiDBLite consensus disorder prediction 1 32 - -
Apr5g0023 541 Gene3D MFS general substrate transporter like domains 57 526 IPR036259 -
Apr5g0023 541 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 39 530 - -
Apr5g0023 541 SUPERFAMILY MFS general substrate transporter 51 522 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0023 Apr-Chr5 166795 170067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0023 1 530 Organic Solute Cotransporters AT3G20660 65.291 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0023 K08202 - gmx:100805613 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0023 5 166795 170067 Apr5g0023 5 166795 170067 ECH
Apr2g0321 2 3802672 3806905 Apr5g0023 5 166795 170067 PCT