Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0321 ATGGCCGCCACATTATCCTCTGATTCCGATGACCTCCGTTCACCGATGCTTCCGCCATCATCGAAGTCGCCAGCATCGGAAAAGCTGTGCATCGACGAGATGCTGCAGAAGTACTGCGGGGAGTTCGGACGGTGGCAGCTGAAGCACTTCATCCTCACGAGCCTCGCTTGGGCTCTCGAGGCCTTTCACACCATGGTCATGATCTTTGCAGAACGTGAACCTGATTGGAGGTGCGTCTCTGGCGCCGCCTGTGACGGCGGAGGAAACATCTGCGACCTCTCGCCAAAGTCATGGGAATGGATCGGCGGCAGCGGCAGCTCCACGGTGTCGGAGTGGAGTTTAATTTGCGGTGAAAAGTTTAAAGTTGGATTGGTTCAGGCCGTGTTCTTCGCCGGTTGCATGATTGGTGCTGGAATATTTGGTCATCTCTCAGACTCCTCTTTAGGAAGAAAAGGCACCCTCACAGTGGTTTGTGCCCTTAATGCCATTTTTGGGTGCTTAACAGCATTCTCCCCTAACTACTTCATCTACGTCCTCCTTCGACTCCTCACAGGTTTCAGCACTGGTGGCGTTGGTCTATGCGCCTTCGTCCTAGCCACCGAGCCAATAGGCCCCACAAAGCGCGGCGCGGCGGGGATGTCCACCTTCTACTTCTTCTCAGGTGGCATTGCTATTCTCTCGGGAATCGCTTACATATTCCAAACATGGCGCTATCTTTACATAGCTTCCTCCATCCCCTCCATCTTCTACATTATCCTTGTCCTTCCCTTTTTATCTGAGTCCCCAAGATGGTACCTTGTTCGTGGTAGAGTAAGTGAAGCCACGAAACTCATGTCCACCATTGCTTCCTCCAACGGGAAGCACCTTCCTGATGGTGTTTTCCTCGCTCTTGATGAAGAAGCATCGGAACCCAGCAACGACGGGTCGGGCTATGACATAACCTTGAAGAACCAAAGCTTGGAAAATAAAGATGCACACATTGGGTCTATATTAGACGTGATTCGTTCCCCTGTTACCCGTGTAAGGTTGGTTCTAGCGGTTGTTCTTAACTTCTTGGGATCCGTAGTTTACTATGGTCTTAGTTTGAACGTCATGAACCTCGAAACCAACCTTTACTTTAACGTTATATTGAATTCCGTGGCGGAAATGCCCGCGTTTACGATAACGGCGGTGCTTTTGGATAGATTTGGAAGGAAACCGTTGACGGTGGCGACGATGTGGTTTAGTGGGGTGTTTTGTTTGATGGGGAGCTTAGTGGGTAACGTTGGGGTGTGGAAGGTTGTGAGAATGGGGTGTGGTGTTTTGGGGATTTTTGGAATGGCGGGTACTTATAATTTATTGTTTATTTATACGGCGGAGCTCTTTCCTACTGTGGTGAGGAACGCCGCGCTTGGGAGTACAACTCAGGCGGCGCAGATGGGTGCTATTTTGGCGCCTTTTGTCGTCGTTTTGGGTGCTTGGATGCCGTTTGCGGTGTTTGCGGCGTGCGGAATAGTTGGAGGAGCACTTGCGTTTTATCTTCCGGAGACGTTGAACCAACCACTTTACGATACCTTTGGTGGAATGGAAGCTGGACTCGCTTGA 1584 0.5076 MAATLSSDSDDLRSPMLPPSSKSPASEKLCIDEMLQKYCGEFGRWQLKHFILTSLAWALEAFHTMVMIFAEREPDWRCVSGAACDGGGNICDLSPKSWEWIGGSGSSTVSEWSLICGEKFKVGLVQAVFFAGCMIGAGIFGHLSDSSLGRKGTLTVVCALNAIFGCLTAFSPNYFIYVLLRLLTGFSTGGVGLCAFVLATEPIGPTKRGAAGMSTFYFFSGGIAILSGIAYIFQTWRYLYIASSIPSIFYIILVLPFLSESPRWYLVRGRVSEATKLMSTIASSNGKHLPDGVFLALDEEASEPSNDGSGYDITLKNQSLENKDAHIGSILDVIRSPVTRVRLVLAVVLNFLGSVVYYGLSLNVMNLETNLYFNVILNSVAEMPAFTITAVLLDRFGRKPLTVATMWFSGVFCLMGSLVGNVGVWKVVRMGCGVLGIFGMAGTYNLLFIYTAELFPTVVRNAALGSTTQAAQMGAILAPFVVVLGAWMPFAVFAACGIVGGALAFYLPETLNQPLYDTFGGMEAGLA* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0321 527 Pfam Sugar (and other) transporter 119 516 IPR005828 GO:0016021|GO:0022857|GO:0055085
Apr2g0321 527 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 31 525 - -
Apr2g0321 527 ProSitePatterns Sugar transport proteins signature 1. 389 405 IPR005829 GO:0016021|GO:0022857|GO:0055085
Apr2g0321 527 MobiDBLite consensus disorder prediction 1 25 - -
Apr2g0321 527 MobiDBLite consensus disorder prediction 1 21 - -
Apr2g0321 527 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 31 525 - -
Apr2g0321 527 ProSiteProfiles Major facilitator superfamily (MFS) profile. 49 512 IPR020846 GO:0022857
Apr2g0321 527 SUPERFAMILY MFS general substrate transporter 121 515 IPR036259 -
Apr2g0321 527 Gene3D MFS general substrate transporter like domains 50 519 IPR036259 -
Apr2g0321 527 ProSitePatterns Sugar transport proteins signature 2. 183 208 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0321 Apr-Chr2 3802672 3806905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0321 1 523 Organic Solute Cotransporters AT3G20660 67.681 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0321 K08202 - gmx:100818415 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0321 2 3802672 3806905 Apr2g0321 2 3802672 3806905 ECH
Apr2g0321 2 3802672 3806905 Apr5g0023 5 166795 170067 PCT