Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2659 ATGGATTGTTGGTCATCTCCTCTCCCTCTCGATGATGAATTCGAGAAGCTTGTTATTCGAATGAATCCTCCAAGAGTCACTGTGGATAACATTTCGAGCAGAACAGCCACTGTGATAAAGGTTGATAGTGCAAACAGGCGTGGAAGCTTGTTGGAAGTCGTTCAGGTTCTTACTGATATGAATCTCATTGTCAGAAGAGCTTACATTTCCTCTGATGGGGAATGGTTCATGGATGTTTTTCATGTTACGGATCAAAATGGGAAGAAGTTTCTTCAAGATGATGTAGCTGACCGCATTCAGCAGTCACTGGGTCCGAGAGCCCGTAGTTTTCGATCTTTGAGAAGGTCTGTTGGGGTTCAAGCTGCAGCTGAACATACGACCATTGAATTAACTGGTAGAGACAGGCCAGGATTGCTTTCAGAAGTTTTTGCTGTTCTTGCAGACCTCAAATGCAATGTGGTAGCTGCAGAAGTGTGGACTCACAATTCAAGAATGGCATCTGTTGTTTACATAACGGATGAGGCGACAGGATTGTCCATCGACAATCCTGATCGCCTTGCGAAGATTAAGCAGCTTCTACTGTATGTACTCAATGGAGACATAGATAAGAAGAGTGCCAACACTGCTGTTTCTGTTGGTTCTACTCACAAGGAAAGGAGGCTGCATCAGTTGATGTATGCCGATCGTGATTATGACATGAATGATGGGGATTTTGGGTCAACAAGTGACAGAAGCAAGCTCCTTGTAACTGTTGATGATTGCACAGATAAGGGATATACTGTTGTGAACTTGAGGTGTCCAGACAGACCAAAGTTATTGTTTGATACTGTGTGCACACTCACAGACATGCAGTATGTTGTGTTCCATGGCACTGTCATTGCTGAAGGACCAGAGGCATGTCAGGAATACTATATAAGGCATGTGGATGGAAGTCCTATCAGTTCTGAGGCAGAAAGGCAGAGAGTGATTCACTGCTTGGAGGCTGCTATTAGGAGACGAACTTCTGAGGGCATAAAGCTAGAACTATGTGGTGAAGACAGGGTTGGTCTTTTATCTGATGTAACTCGCATCTTTAGAGAAAATGGTCTTTCAGTCAACCGTGCTGAAGTTACAACAAGGGGTTCCCAAGCCATGAATGTTTTCTATGTTACTGATGTATCTGGAAATCCGGTTAAGAGTGAAACAATTGAGGCAGTTAGAAAAGAGATTGGCTTGACCATACTACAAGTAAAAGATGATGTTTGCTCAAAAGCTCCATCCCAGGAGAGTGGAAAATTCTCTCTGTGTAATCTCTTTCGGTCAAGCTCTGAGAAGTTTCTTTACAACTTGGGTTTGATGAAGTCTTGTTCTTGA 1353 0.4324 MDCWSSPLPLDDEFEKLVIRMNPPRVTVDNISSRTATVIKVDSANRRGSLLEVVQVLTDMNLIVRRAYISSDGEWFMDVFHVTDQNGKKFLQDDVADRIQQSLGPRARSFRSLRRSVGVQAAAEHTTIELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDNPDRLAKIKQLLLYVLNGDIDKKSANTAVSVGSTHKERRLHQLMYADRDYDMNDGDFGSTSDRSKLLVTVDDCTDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHGTVIAEGPEACQEYYIRHVDGSPISSEAERQRVIHCLEAAIRRRTSEGIKLELCGEDRVGLLSDVTRIFRENGLSVNRAEVTTRGSQAMNVFYVTDVSGNPVKSETIEAVRKEIGLTILQVKDDVCSKAPSQESGKFSLCNLFRSSSEKFLYNLGLMKSCS* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2659 450 SUPERFAMILY ACT-like 124 194 IPR045865 -
Apr4g2659 450 CDD ACT_ACR_4 337 408 - -
Apr4g2659 450 Gene3D - 337 412 - -
Apr4g2659 450 ProSiteProfiles ACT domain profile. 339 417 IPR002912 -
Apr4g2659 450 SUPERFAMILY ACT-like 34 105 IPR045865 -
Apr4g2659 450 Pfam ACT domain 341 398 IPR002912 -
Apr4g2659 450 Pfam ACT domain 126 174 IPR002912 -
Apr4g2659 450 Pfam ACT domain 37 86 IPR002912 -
Apr4g2659 450 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 448 IPR040217 -
Apr4g2659 450 CDD ACT_ACR_2 126 199 - -
Apr4g2659 450 ProSiteProfiles ACT domain profile. 38 118 IPR002912 -
Apr4g2659 450 Gene3D - 125 196 - -
Apr4g2659 450 PANTHER OS08G0515400 PROTEIN 2 448 - -
Apr4g2659 450 ProSiteProfiles ACT domain profile. 127 204 IPR002912 -
Apr4g2659 450 CDD ACT_ACR_3 259 333 - -
Apr4g2659 450 SUPERFAMILY ACT-like 335 404 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2659 Apr-Chr4 35323764 35326588 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2659 - - gmx:100798999 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2659 4 35323764 35326588 Apr4g2659 4 35323764 35326588 ECH
Apr4g2659 4 35323764 35326588 Apr4g1595 4 17990938 17995043 ECH