Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1595 ATGGATGATGAATATGCTAAGCTTATTAGGAGGATGAACCCACCCAGGGTTGTGATAGACAACAATGCCTGTGAACACGCCACGGTTATTCAGGTTGACAGTGTCAACAAACATGGGATTCTCCTGGATGTTGTACAAGTTATTTCAGATATGAACCTTGTAATAACAAAGGCCTACATCTCCTCCGATGGAGTGTGGTTCATGGATGTATTTAATGTGATTGATCATAATGGAAACAAAATCAGAGACAAGGAAGTCATTGATTATATTCAAAGGAGACTTGAAAACAATCCCAGCTTTGTGCCATCATTGAGAGAGTCTGTTGGGGTTGTACCTACTGAAGAGCACACTGTTATTGAACTTACGGGCACTGACAGGCCTGGGTTACTATCTGAAATCTGTGCAGTTCTCGCAGACCTTCACTGTAATGTGGTGACTGCTGAGATATGGACACATAATACTAGGGCTGCGGCTGTAGTCCATGTGACAGATGATTCCAGTGGGTGTGCCATCAAGGATCCATCGCGCCTTTCTTCAATAAGGGATTTGCTTTGTAATGTCCTTAGGGGCAGTGATGATCCAAAGACAGCAAGAACAACACTTTCACCCCCTGGAGTAACAAATAGGGACAGAAGATTACATCAGATTATGTTTGCTGACAGGGACTATGAAAGGGTTGAAAAAGCAGGAAAAGGGGGACTCAGAGATAGCGATGAACGCCCATTTCCTCATGTAACCGTCTTAGATTGTGTTGAGAAAGATTACACTGTGGTTACCATGAGAGCAAAAGATCGATCAAAATTGTTGTTCGATATTGTCTGCACTTTAACTGACATGCAGTATGTAGTTTTTCATGGGGTTGTCCAGACAATAAGGACAGAAGCTTATCAGGAGTTTTATATTCGACATGTCGATGGCTTTCCCATAAGTTCAGAGGCTGAGCGAGAACGACTTGTGCAGTGTCTTGAAGCAGCAATTGAAAGGCGGGCATCTGAGGGAATGGAGCTGGAGTTGCGCACAGATGATCGTGTAGGACTCCTCTCAGATATCACAAGAATATTTCGAGAGAACAGTTTATGCATCAAAAGAGCAGAAATATCAACAGAAGATGGAAAGGCTAAAGATACTTTTTATGTCACAGATGTGACTGGTAACCCAGTTGACCCTAAGATTATAGATTCAATTCGCAGACAGATTGGTGACAAGGTACTGCAAGTAAAACATAACTCTAATCTGTCACCAAAGGCCCCTCAATCAACAACAATTGGATTTCTCTTAGGAAATTTTTTCAAAGCTCGATCTTTTCAGAATTTTAAGTTGATCAGATCTTATTCTTAA 1338 0.417 MDDEYAKLIRRMNPPRVVIDNNACEHATVIQVDSVNKHGILLDVVQVISDMNLVITKAYISSDGVWFMDVFNVIDHNGNKIRDKEVIDYIQRRLENNPSFVPSLRESVGVVPTEEHTVIELTGTDRPGLLSEICAVLADLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSSIRDLLCNVLRGSDDPKTARTTLSPPGVTNRDRRLHQIMFADRDYERVEKAGKGGLRDSDERPFPHVTVLDCVEKDYTVVTMRAKDRSKLLFDIVCTLTDMQYVVFHGVVQTIRTEAYQEFYIRHVDGFPISSEAERERLVQCLEAAIERRASEGMELELRTDDRVGLLSDITRIFRENSLCIKRAEISTEDGKAKDTFYVTDVTGNPVDPKIIDSIRRQIGDKVLQVKHNSNLSPKAPQSTTIGFLLGNFFKARSFQNFKLIRSYS* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1595 445 CDD ACT_ACR_4 333 404 - -
Apr4g1595 445 SUPERFAMILY ACT-like 24 95 IPR045865 -
Apr4g1595 445 SUPERFAMILY ACT-like 112 187 IPR045865 -
Apr4g1595 445 CDD ACT_ACR_2 117 190 - -
Apr4g1595 445 Gene3D - 334 410 - -
Apr4g1595 445 Gene3D - 112 187 - -
Apr4g1595 445 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR6 1 437 - -
Apr4g1595 445 ProSiteProfiles ACT domain profile. 335 414 IPR002912 -
Apr4g1595 445 Pfam ACT domain 117 166 IPR002912 -
Apr4g1595 445 Pfam ACT domain 28 79 IPR002912 -
Apr4g1595 445 ProSiteProfiles ACT domain profile. 29 108 IPR002912 -
Apr4g1595 445 CDD ACT_ACR_3 255 329 - -
Apr4g1595 445 ProSiteProfiles ACT domain profile. 118 204 IPR002912 -
Apr4g1595 445 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 437 IPR040217 -
Apr4g1595 445 SUPERFAMILY ACT-like 331 401 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1595 Apr-Chr4 17990938 17995043 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1595 - - gmx:100818506 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1595 4 17990938 17995043 Apr4g1595 4 17990938 17995043 ECH
Apr4g2659 4 35323764 35326588 Apr4g1595 4 17990938 17995043 ECH