Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2391 ATGAGGCTTCCCATAAAAACACTACGTCCACCTCCAAGCACACTCCCTTCAACCCAAAACCACACCATCCTCAAACCACGCTGCATAACCATGACCCAACCATCTAAACAAACCAACCTCTCTACTGACACACGAGAGGCCGCATTACATTTAGAGAAAATGATAAATTTAGAACACATCCATAACAATAATAATTTTCCATCGATGCAATCATCACCACCATCATCATCAACAATACCTTTTAATCTAAAAGCCGAGAGAATTGGAAAGAGGTGGAAAGAGTACCAAGGGATGAGCAATTGGGACGGTTTACTAGACCCATTGGACGACAATCTACGAGCTGAAATTCTACGCTATGGTCATTTCGTGGAAGCTGCTTATAACTCCTTTGAGTTTGACCCTTCCTCTCCCAACTACGCCAATTGTAGGTACCCCAAAAGCACACTTTTCGAACGGTGTGGTTTACCTAACACAGGTTACAAGGTAACCAAACACCTACGTGCAACTTCAGGGATTCAGCTACCTAATTGGGTGGACAAAGCACCAAGCTGGGTATCAACACAATCAAGCTACGTGGGATATGTAGCGGTGTGTGAAAACAAGGAAGAGATCAAAAGACTTGGTCGGCGCGACATCGTTGTTGCATATAGAGGAACCACCACATGCTTGGAATGGTTGGAGAATTTTCGTGCCACTCTCACCAACCTCCCAATCCCATGCAGCAGCAAAAGAGCCTTTGAAAAAAATTGTGCCATGGACGGAAGTGGGCCCATGGTAGAAAGTGGATTCTTGAGTCTTTATACTTCATTTCTTGCAAACTGGTCGAGTTTGCAAGAAATGGTGAAACAAGAGATCTCAAGAATCATCCAAAACTATGGCGAGGAGCCGTTAAGCTTGACCGTCACCGGCCATAGTCTGGGAGCGGCATTGGCAACGCTCACGGCGTATGACATTAAAACTATCTTTCACAGGTTGCCGGTGACGGTTATATCTTTTGGCGGCCCCCGTGTCGGAGACCGGAATTTCCGGCAGCAGCTAGAGAGGCAAGGGACTAAGGTTTTGCGCATAGTGAACTCCGATGATGTTATTACTAAGGTTCCAGGCTTTGTGTTTGATGATGACGTGGCAAGCGATGGAGCGGTCCACATGGCAGGCTTTCCGAACTGGATACAGAAGAGGGTTGAGGAGGCACAATGGGTGTACGCTGAGGTTGGGAGGGAACTCCGGTTATGTAGCAGGGACTCTCCATACCTCGGAAGTACTAATGTTGCCACGTGTCACGAGCTGAACACGTATCTGCACCTCGTTGATGGCTTTGTCAGCTCCACGTGTCCTTTCAGAGCCTCCGCCAAGAGGTTCCTCCGTCGCTGA 1371 0.4756 MRLPIKTLRPPPSTLPSTQNHTILKPRCITMTQPSKQTNLSTDTREAALHLEKMINLEHIHNNNNFPSMQSSPPSSSTIPFNLKAERIGKRWKEYQGMSNWDGLLDPLDDNLRAEILRYGHFVEAAYNSFEFDPSSPNYANCRYPKSTLFERCGLPNTGYKVTKHLRATSGIQLPNWVDKAPSWVSTQSSYVGYVAVCENKEEIKRLGRRDIVVAYRGTTTCLEWLENFRATLTNLPIPCSSKRAFEKNCAMDGSGPMVESGFLSLYTSFLANWSSLQEMVKQEISRIIQNYGEEPLSLTVTGHSLGAALATLTAYDIKTIFHRLPVTVISFGGPRVGDRNFRQQLERQGTKVLRIVNSDDVITKVPGFVFDDDVASDGAVHMAGFPNWIQKRVEEAQWVYAEVGRELRLCSRDSPYLGSTNVATCHELNTYLHLVDGFVSSTCPFRASAKRFLRR* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2391 456 MobiDBLite consensus disorder prediction 1 20 - -
Apr4g2391 456 Gene3D alpha/beta hydrolase 91 455 IPR029058 -
Apr4g2391 456 CDD Lipase_3 168 390 - -
Apr4g2391 456 Pfam Lipase (class 3) 213 369 IPR002921 GO:0006629
Apr4g2391 456 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 50 455 - -
Apr4g2391 456 SUPERFAMILY alpha/beta-Hydrolases 115 370 IPR029058 -
Apr4g2391 456 PANTHER PHOSPHOLIPASE A(1) DAD1, CHLOROPLASTIC 50 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2391 Apr-Chr4 32847370 32848740 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2391 62 456 Acyl Lipid Metabolism Gene Families AT2G44810 65.909 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2391 K16818 - gmx:100800549 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2391 4 32847370 32848740 Apr4g2391 4 32847370 32848740 ECH
Apr10g0492 10 11910781 11912082 Apr4g2391 4 32847370 32848740 PCT