Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0492 ATGAGGCTTGGTATCAAAACAGCCGCAATCCAACCACTTGCATCATCTTCTATTTCCAAACCCAACCCTACTTTGATTTCTTCATCCGAATCCACCGTATGCTCACAATTCAACAACAAGTCTTTGTTCTCATGGAGTCGACTCAAGCCTAACTCAGCCAAATGCAACTTCCCAAAACTTGGGCACAAGTGGAAGCAATACCAAGGAATTAACAATTGGGAAGGTTTGCTAGATCCTCTTGATGATAACCTACGCTTGGAAATCTTAAGATACGGTCACTTTGTGGATGCTGCCTATTATTCCTTTGACTTTGATTATTCTTCTCTCACTTATGCCACTTGTCTTTACCCTAAAAAATCACTTTTGAGACGGTGTGGTTTGGCAAACTACGGATATCGGTTAACCAAAAATCTGCGTGTGACGTGTGGAATTCACATACCAACGTGGATGAATAAAATGTTTAAGTGGACTTGTACACAATCTTGTTGGATTGGGTACGTAGCAATTTGTGAACACAAAAATGAAATTACTCGACTTGGTAGACGCGACATTGTGATTGCTTTTAGGGGAACAGCTACATGTTTGGAGTGGTTAGAAAACCTACGTGCCACCTTAACACACTTGCCAAATCATGTAGAAGAAGAAGAAGAAGAAGATAGTGTTAGTCCAATGGTGCAAAAAGGGTTTTTGAGCCTTTACACATCCAAAACCACCACACATGCAAGCTTGCAAGAAATGGTGAGAGAAGAGATTGGAAGAGTAATCCAAACATACACCAACGAGCCACTCAGTTTAACCCTAACCGGCCACAGTCTTGGAGCCGCACTCGCAATCTTGAGCGCGTATGATATAACCGCCACTTTCAACGATGCACCGATGGTAACCGTTGTGTCTTTTGGTGGGCCCCGCGTCGGAAACGAGAGTTTTAGGAAACAATTGGAACAACGTGGGATTAAAATACTAAGAATAGTAAATTCTGATGATGTTGTGACTAGGGTTCCAGGGTTTGTAGTGAACTTAGATGACGTGGCAAGCAACAGTGGTGTCCACGTGGGAATCTTGTCACGATGGTTGCACACGTGCGTAGAGGACATGCAATTGGTGTATGCTGACATTGGACAAGAATTGAGGCTAAGTAGCAAGGAATCACCATATCTCAGTAGGGGAGACGTTGCCATGTGTCACGATCTCAAGACATACCTTCATTTGGTAAAAAATTTTGTAAGCTCGTCATGCCCTTGCACACACAAAAATTCAACTCCTTTTAGCCATGAATTTGAATCTTCTTCGCTTCTTGAATAA 1302 0.4247 MRLGIKTAAIQPLASSSISKPNPTLISSSESTVCSQFNNKSLFSWSRLKPNSAKCNFPKLGHKWKQYQGINNWEGLLDPLDDNLRLEILRYGHFVDAAYYSFDFDYSSLTYATCLYPKKSLLRRCGLANYGYRLTKNLRVTCGIHIPTWMNKMFKWTCTQSCWIGYVAICEHKNEITRLGRRDIVIAFRGTATCLEWLENLRATLTHLPNHVEEEEEEDSVSPMVQKGFLSLYTSKTTTHASLQEMVREEIGRVIQTYTNEPLSLTLTGHSLGAALAILSAYDITATFNDAPMVTVVSFGGPRVGNESFRKQLEQRGIKILRIVNSDDVVTRVPGFVVNLDDVASNSGVHVGILSRWLHTCVEDMQLVYADIGQELRLSSKESPYLSRGDVAMCHDLKTYLHLVKNFVSSSCPCTHKNSTPFSHEFESSSLLE* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0492 433 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 41 421 - -
Apr10g0492 433 Coils Coil 198 218 - -
Apr10g0492 433 CDD Lipase_3 151 342 - -
Apr10g0492 433 Pfam Lipase (class 3) 185 336 IPR002921 GO:0006629
Apr10g0492 433 SUPERFAMILY alpha/beta-Hydrolases 100 379 IPR029058 -
Apr10g0492 433 Gene3D alpha/beta hydrolase 63 426 IPR029058 -
Apr10g0492 433 PANTHER PHOSPHOLIPASE A(1) DAD1, CHLOROPLASTIC 41 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0492 Apr-Chr10 11910781 11912082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0492 13 413 Acyl Lipid Metabolism Gene Families AT2G44810 58.209 1.87e-165 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0492 K16818 - gmx:106798329 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0492 10 11910781 11912082 Apr10g0492 10 11910781 11912082 ECH
Apr10g0492 10 11910781 11912082 Apr4g2391 4 32847370 32848740 PCT