Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2389 ATGGCAACTATGAACCCTTTTGATTTGTTGGGTGATGATGCTGAAGACCCTTCTCAGCTCATCGCAGCTGAACAGCTCAAGGCAGCCTCAGCTGCAGCCGCGGCTCCCAAAAAGGCTCAGCCGCAGCAGCGAGCCGCTCAGACTCAGCCCAACAAGCCGGCTCAGTTGCCTTCCAAGCCGCCTCCGCCGGCTCAGGCTGTGAGGGAGGCTAGAAATGAGCCATCTCGGGGAGGCCGAGGAGGTGGACGAGGCAGCGGACGTGGATATGGGCGTGGTCGTGGTTTTAGTCGCGACTCTTCCAATGAAGAGAACTCATTCCCTGCCACTGGAGGTTCCGATAATCAGGGTCCTTTTGAAGAAGGAGATGCTGGGAAGGCTTCAGAAAGACGCGGGGGTTATGGTGGACCACGAGGTCCCTATCGTGGTGGTGGTCGTCGTGGAGGTTTCAGCAATGGTGATGCTGGGGATGAAGGACGACCTCGAAGAGCATTTGATCGTCGCAGTGGGACTGGAAGAGGAGTGGAATTTAAGCGTGAAGGTGCTGGACGTGGTAACTGGGGAACACAAACTGATGAAATTGCTCAGGCAACTGATGAAGTTGTGAATGAAACTGAAAAGAATTTGGGTGATGAGAAGCCTGTGGCCGAAGAAGATGTAGCTGATGGAAACAAGGAGAGTCCTGCCAATGAAACTGAAGAAAAAGAGCCTGAAGATAAGGAGATGACTCTGGAAGAATATGAGAAACTGCTGGAAGAGAAAAGGAAGGCCTTGCAGACACTTAAGACTGAAGAAAGAAAGGTAGACATTAAAGAGTTTGAATCCATGCAACCCTTATCAAGCAAGAAAGACAATCATGACATCTTCATTAAACTGGGGTCTGATAAGGATAAGCGAAAAGAGGCTTTTGAGAAGGAAGAGAAATCCAAGAAGTCTGTCAGCATAAACGAGTTTCTGAAGCCTGCTGAAGGGGAAGCCTACTACAACTCAGGTGGGCGTGGAAGGGGACGTGGCCGCGGACGTGGTGGTTATCGTGGAAATGCTACGAGCAATGCAGCTGCTCCATCCATTGAAGATCCTGGGCATTTCCCAACCTTGAGTGGCAAGTGA 1107 0.5113 MATMNPFDLLGDDAEDPSQLIAAEQLKAASAAAAAPKKAQPQQRAAQTQPNKPAQLPSKPPPPAQAVREARNEPSRGGRGGGRGSGRGYGRGRGFSRDSSNEENSFPATGGSDNQGPFEEGDAGKASERRGGYGGPRGPYRGGGRRGGFSNGDAGDEGRPRRAFDRRSGTGRGVEFKREGAGRGNWGTQTDEIAQATDEVVNETEKNLGDEKPVAEEDVADGNKESPANETEEKEPEDKEMTLEEYEKLLEEKRKALQTLKTEERKVDIKEFESMQPLSSKKDNHDIFIKLGSDKDKRKEAFEKEEKSKKSVSINEFLKPAEGEAYYNSGGRGRGRGRGRGGYRGNATSNAAAPSIEDPGHFPTLSGK* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2389 368 MobiDBLite consensus disorder prediction 294 313 - -
Apr4g2389 368 SMART HABP4_PAI_RBP1_2 160 268 IPR006861 -
Apr4g2389 368 Pfam Hyaluronan / mRNA binding family 160 267 IPR006861 -
Apr4g2389 368 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 368 IPR039764 GO:0003723
Apr4g2389 368 Pfam Stm1 1 81 IPR019084 -
Apr4g2389 368 Gene3D - 158 271 - -
Apr4g2389 368 Coils Coil 239 266 - -
Apr4g2389 368 MobiDBLite consensus disorder prediction 188 202 - -
Apr4g2389 368 MobiDBLite consensus disorder prediction 203 241 - -
Apr4g2389 368 MobiDBLite consensus disorder prediction 155 179 - -
Apr4g2389 368 MobiDBLite consensus disorder prediction 27 241 - -
Apr4g2389 368 MobiDBLite consensus disorder prediction 294 368 - -
Apr4g2389 368 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2389 Apr-Chr4 32798528 32803895 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2389 K13199 - gmx:100814825 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2389 4 32798528 32803895 Apr4g2389 4 32798528 32803895 ECH
Apr10g0489 10 11851348 11855331 Apr4g2389 4 32798528 32803895 PCT