Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2262 ATGGATGTAGAAGTGATGAAAAAGTCACCTTCTCAATCTGCAATAAGGCTTTTAGTGCTGGTTGTGTTTCTGGGTTGGATTTTCATTTGGATAATGGCTCCCACAAACACTTACAAACGAAAATGGATGCCTCGGCTTCAAGCAAAGACTCATTCTATTTTTGGTGTACAAGGTGCAATACTTCTGGTTTACACTTCTCCAATCTTGTTCATAGCAGTTTTGGGATGTATATACCTTCACATAGCCGAAAAAGAAAATGGATTCAACATGGAAAGATGCATTAATTATGGCAATAAACATGAGGTATCCATATGGAAGCGTGCAGTGCTCGTGAGAGGCCCTCTTGGCATAGTTTCTGGCACAGAATTTGCTTTCTTATTTATGTTCATTGGACTCCTAGTTTGGTCCTTTTCAATTTATCTGCACAATGACTTTGCCAAAATCACCCACAAAGCAGCAGCAGAACGCGGAGTAAAAGTATGGGAGAAGAAACTAGATAGTGCAGCTTTGAGGTTGGGCCTAGTTGGGAACATATGTTTAGCATTCCTGTTTTTTCCAGTGGCTCGTGGTTCCTCAGTGTTGCCACTGCTTGGACTCACATCAGAGAGTTGCATCAAATACCATATTTGGCTTGGACACGTGGCCATGGCCCTTTTCACTACTCATGGTATTTGTTTCATCGTTTATTGGGCAGTTACTGATCAACTTTCTAAGATTCTGGAATGGAAAAAAAATGGGATATCAAATGTTGCTGGAGAACTTGCTTTGCTTGCTGGTTTGTTAATGTGGATTACAACCATCCCTCGCATTAGGAAAAAAGTCTTTGAACTCTTCTTCTACACTCACTACCTCTACATCCTCTTCATTGTATTTTTCATCTTTCATGTGGGCATCTACCCTGCATGCATTATGCTCCCTGGTTTCTACCTCTTCTTAGTCGATCGTTACCTAAGGATTTTGCAATCAAGACGCCAAGTTTGTTTGGTTTCTGCTCGTGTTTTGCCTTGTGAAACTGTAGAGCTCAATTTCTACAAGAGCCATGGGTTGACTTATAATCCCACAAGTATTATGTTCATAAATATACCAAGTATATCAAAGCTACAGTGGCATCCATTTACCATTACTTCTAATAGTAACTTGGAGCCAAAAATGCTGAGTGTAGTCATAAAAGGTGAAGGAACTTGGTCCCAGAAGCTCTACCAGATGCTTTCAACACCTTCTGTAATAGATCATCTCAATATCTCTGTTGAAGGTCCTTATGGACCTTCATCAACCAATTATCTAAGGTATGACACTATAGTGATGGTTAGTGGAGGGAGTGGAATCACCCCCTTTGTGTCCATTATCCGAGAGCTAATGTATTTGAGCGCAAATTTCAGATACAGAACCCCAAAAGTTATCCTAATTTGTGCATTCAAGAACTCTTCATATCTCTCAATACTAGATCTTATCCTTCCAAATTATGGTACCCCATGTGACAGTTCTGATATGCAACTACAAGTTGAAGCCTACATCACAGGAAAGAACGAGCCAAAATTGGATAGCCAAATTCACCTTAAACAAATATGGTTCAAACCCAATGCAAAAGATGCACCCATATCTGCTATTTTAGGTCCAAACAGTTGGCTGTGGCTCTGTGCTATAATCTCATCCTCATTCATAGTTTTCCTTATCTTAATCGGGATGATTACCAGTTACTATATTTTCCCTATCGATCATAATTCTAATAAAATATTTTCATACCCTTTGAGGTCTTTCCTCAACATGTTAGCAATATGTGTGTCCATAGCGATGGCTGCTAGTGTAGCTGTTCTTTGGAATACGAAACACAACAACGAAGAAGCAAAGCAGATTCAGAACATGGAAGGGTCATCATCATCAGTGTCCCCAGAGTTGAAGAGTGATAGAGTAGATAGAGAAATGGAAAGCCTCCCTCACCAATCCCTTGTTCAAGCTACGAACGTGCATTATGGTGTAAGACCTGATCTAAGAAGATTGCTATTTGAACATAAAGGGTCAAGTGTGGGAGTTTTTGTTTCTGGACCCAAGAAGATGAGACAGGAGGTTGCAGCCATTTGCTCATCTGATGTAGCTAAAAATCTGCATTTTGAGTCCTTCAGCTTTAACTGGTAG 2133 0.4008 MDVEVMKKSPSQSAIRLLVLVVFLGWIFIWIMAPTNTYKRKWMPRLQAKTHSIFGVQGAILLVYTSPILFIAVLGCIYLHIAEKENGFNMERCINYGNKHEVSIWKRAVLVRGPLGIVSGTEFAFLFMFIGLLVWSFSIYLHNDFAKITHKAAAERGVKVWEKKLDSAALRLGLVGNICLAFLFFPVARGSSVLPLLGLTSESCIKYHIWLGHVAMALFTTHGICFIVYWAVTDQLSKILEWKKNGISNVAGELALLAGLLMWITTIPRIRKKVFELFFYTHYLYILFIVFFIFHVGIYPACIMLPGFYLFLVDRYLRILQSRRQVCLVSARVLPCETVELNFYKSHGLTYNPTSIMFINIPSISKLQWHPFTITSNSNLEPKMLSVVIKGEGTWSQKLYQMLSTPSVIDHLNISVEGPYGPSSTNYLRYDTIVMVSGGSGITPFVSIIRELMYLSANFRYRTPKVILICAFKNSSYLSILDLILPNYGTPCDSSDMQLQVEAYITGKNEPKLDSQIHLKQIWFKPNAKDAPISAILGPNSWLWLCAIISSSFIVFLILIGMITSYYIFPIDHNSNKIFSYPLRSFLNMLAICVSIAMAASVAVLWNTKHNNEEAKQIQNMEGSSSSVSPELKSDRVDREMESLPHQSLVQATNVHYGVRPDLRRLLFEHKGSSVGVFVSGPKKMRQEVAAICSSDVAKNLHFESFSFNW* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2262 710 CDD NOX_Duox_like_FAD_NADP 328 507 - -
Apr4g2262 710 Pfam Ferric reductase like transmembrane component 172 292 IPR013130 -
Apr4g2262 710 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 414 484 IPR039261 -
Apr4g2262 710 Gene3D - 414 537 IPR039261 -
Apr4g2262 710 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 321 426 IPR017927 GO:0016491
Apr4g2262 710 Gene3D - 598 709 IPR039261 -
Apr4g2262 710 SFLD Ferric Reductase Domain 34 710 - -
Apr4g2262 710 Pfam Ferric reductase NAD binding domain 430 694 IPR013121 GO:0016491
Apr4g2262 710 Pfam FAD-binding domain 328 424 IPR013112 GO:0016491
Apr4g2262 710 SFLD Ferric reductase subgroup (FRE) 18 710 - -
Apr4g2262 710 PANTHER FERRIC REDUCTION OXIDASE 2 12 709 - -
Apr4g2262 710 PANTHER NADPH OXIDASE 12 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2262 Apr-Chr4 31665299 31670208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2262 12 710 Miscellaneous Gene Families AT1G01580 55.367 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2262 K00521 - gmx:100814642 1172.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2262 4 31665299 31670208 Apr10g1309 10 25409598 25413531 PCT