Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1309 ATGGCTGAAGATATGGTAGTGAAAAGGTCACCTTCTCAAGAAAAACTTGGCAGGGTTCAATTTGCAATAAGGGTATTGGTGCTACTAGTGTTTCTGGGTTGGATTTTCATTTGGGCAGTTATGCCCACAAATATTTATAGGCAATCATGGTTGCCTCAATACCAAGCAAAGATTAATTCAACCTATTTTGGTGCTCAAGGTGCTACACTTCTTATGTACCCTTTCCCTGTCTTACTCATTGCTATTTTGGGATGTGTCCACCTTCACATAGCCAAAAAAGCAAATGATTCCAAAATTGCAAGTGGCAATGCAAAGAAACGTGAGGTGACCACATGGAAGCGTCCAATGCTCATGAAAGGCCCTCTTGGCATTGTTTCTGGCATAGAACTGGGATTCTTGCTTATGTTTATTGCACTCCTAGTGTGGTCCTTTGCAACTTCTTTACACAATAGCTTTGTAACAATCACCCCAGAATTGGCAGCGAAGGATGGCCAGAAAATATGGGAAGAGAAACTAGATCGTGCAGCTTTAAGGTTGGGTCTGGTTGGGAATATATGCTTAGCATTCTTGTTTTTTCCGGTGGCTCGTGGGTCATGTGTGCTGCCACTGCTTGGCCTCACCTCGGAGAATAGCATAAAGTACCATATTTGGCTTGGACATTTGGCCATGACCCTCTTCACTGCTCACGGCCTTTGCTACATCATCTATTGGGCAGCTACCTCTCAAATTTCTCAGATGCTGAAATGGGACAAAGTTGGTGTATCAAATGTGGCAGGAGAACTAGCTTTGCTTTTCGGTTTGTTCCTATGGATTGCAACCATTCCTCGAATTAGAAGAAAAGCCTTTGAGCTCTTCTTCTATACTCATCACCTCTACATCCTCTTCATAGTATTCTTCATCTTTCATGTTAGCATTTCCTTTGTATGCATTACACTCCCTGGTTTCTACCTCTTCTTGGTTGATCGTTTCTTAAGATTTCTACAATCAAGGCACCAAGTTCGTTTGGTTTCTGCTCGTGTTTTGCCATGTGAAACTATAGAACTCAACTTTTCTAAGGGCCATGGGTTGACTTACAACCTCACAAGTGTTATGTTCTTAAATGTACCAAGCATATCCAAGTTGCAATGGCATCCATTTACCATTACTTCTAATAGTAACTTGGAGCAAGACAAGCTAAGTGTTGTCATTAAAAGTGAAGGAACTTGGACTCAGAAGCTCTATCAACTACTTTCAACTCCTTCAACAATAGATCGCCTTGCTGTATCTGTTGAAGGTCCTTATGGAACTGCTTCAACCAATTATCTAAGGCATGACACTCTTGTGATGGTGAGTGGAGGAAGTGGCATCACACCTTTTATCTCTATCATTCGGGAGCTAATATATCTAAACACTACATTTAAATGCAAAACACCAAAAGTTGTCCTAATCTGTGCCTTCAAGAACACTTCATCTCTGTCAATGCTAGATTTGATCCTGCCAATATCTGGCACCTCATTTGACATTTCTAATCTTGAATTGCAAATTGAGGCCTACATCACAAGAGACAAGGAGCCTAAAGCAGATGGTCAAATTCACCCTCAAACTATATGGTTCAAGCCAAATCCAAATGATGCACCCGTACATGCTATATTAGGTCCAAACAGTTGGCTTTGGCTTGGTGCTACAATCTCATCCTCTTTCATTATTTTCCTTATCTTAATAGGGATAATTACCCGTTACTACATTTTTCCAATTGATCATAACTCGAATGAAATATTCTCTTTCCCTTTGAGGTCTTTCCTTAACATGCTAGTAATATGCGTGTCCATAGTTAGTGTTGCTAGTGCAGCTTTTCTTTGGAACAAGAAACACAATGCTAAAGAAGCAAAACAGATTCAAAACTTGGAAGGATCGTCACCAACAGTGTCACCAAACTCCATGGTTTACAATGCAGATAGAGAATTGGAAAGCCTTCCATACCAATCCCTTATTCAATCTACGAATGTACATTATGGTGTAAGACCTGACCTAAGAAGAATACTACTTGAACTCAAAGCGTCAAGTATGGGAGTTTTTGCTTCAGGACCCAAAATAATGAGGCAGGAGGTTGCAGCCATTTGCTCATCTAGTTTAGCTGAAAATCTGCATTTTGAGTCTATTAGCTTTAGCTGGTGA 2154 0.4053 MAEDMVVKRSPSQEKLGRVQFAIRVLVLLVFLGWIFIWAVMPTNIYRQSWLPQYQAKINSTYFGAQGATLLMYPFPVLLIAILGCVHLHIAKKANDSKIASGNAKKREVTTWKRPMLMKGPLGIVSGIELGFLLMFIALLVWSFATSLHNSFVTITPELAAKDGQKIWEEKLDRAALRLGLVGNICLAFLFFPVARGSCVLPLLGLTSENSIKYHIWLGHLAMTLFTAHGLCYIIYWAATSQISQMLKWDKVGVSNVAGELALLFGLFLWIATIPRIRRKAFELFFYTHHLYILFIVFFIFHVSISFVCITLPGFYLFLVDRFLRFLQSRHQVRLVSARVLPCETIELNFSKGHGLTYNLTSVMFLNVPSISKLQWHPFTITSNSNLEQDKLSVVIKSEGTWTQKLYQLLSTPSTIDRLAVSVEGPYGTASTNYLRHDTLVMVSGGSGITPFISIIRELIYLNTTFKCKTPKVVLICAFKNTSSLSMLDLILPISGTSFDISNLELQIEAYITRDKEPKADGQIHPQTIWFKPNPNDAPVHAILGPNSWLWLGATISSSFIIFLILIGIITRYYIFPIDHNSNEIFSFPLRSFLNMLVICVSIVSVASAAFLWNKKHNAKEAKQIQNLEGSSPTVSPNSMVYNADRELESLPYQSLIQSTNVHYGVRPDLRRILLELKASSMGVFASGPKIMRQEVAAICSSSLAENLHFESISFSW* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1309 717 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 421 494 IPR039261 -
Apr10g1309 717 Pfam FAD-binding domain 332 431 IPR013112 GO:0016491
Apr10g1309 717 PANTHER NADPH OXIDASE 20 716 - -
Apr10g1309 717 Pfam Ferric reductase NAD binding domain 437 701 IPR013121 GO:0016491
Apr10g1309 717 PANTHER FERRIC REDUCTION OXIDASE 2 20 716 - -
Apr10g1309 717 CDD NOX_Duox_like_FAD_NADP 335 514 - -
Apr10g1309 717 Gene3D - 421 542 IPR039261 -
Apr10g1309 717 SFLD Ferric reductase subgroup (FRE) 25 717 - -
Apr10g1309 717 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 328 433 IPR017927 GO:0016491
Apr10g1309 717 Pfam Ferric reductase like transmembrane component 179 299 IPR013130 -
Apr10g1309 717 SFLD Ferric Reductase Domain 41 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1309 Apr-Chr10 25409598 25413531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1309 10 717 Miscellaneous Gene Families AT1G01580 58.766 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1309 K00521 - gmx:100790114 1146.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2262 4 31665299 31670208 Apr10g1309 10 25409598 25413531 PCT