Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2255 ATGGCTTTCAATTTGATTTCCTGGCTTCATCCCATTTCGGTTCTCAGTGTTTTGGTACTCTTTTTTTATTCCTTTGGCCTTTTCTCTGCAAATGATGAAGTGGGCACAGTTGAAGGTGAAACCTTTACTGTTTCAAGCTTCAGCTACCCTGAGACTAGGCTCAGGCCCTTTGATTTGCGCTATATCAGAGTTGACTTGCCGCCATGGTTTTCTGCAATGTCTGTAGCATTGAACTCTGATGTAGACCTTGATGTCTCAAAAATTGAGAGAGTTCCAATGAGCACATTGCCGATAATATGCTTTAGAGATGGAAGTCCTCCACTGCCGGATGCCTTAAACACCTCTCTTAAAGATTCAGCCATCTCAGGGATAAATGGTCTAGATGTGGAGCAGTGCTTTCCTATGCAGAAAAATATTACCATGAAACTGTCAAACAATCAGATATCTCCAGGTGTTTGGTATATTGGTCTTTTCAATGGCATTGGACCTACAAGGACACAATCAAAGATGATTATTCGAGGTCCATCGTACTCTTTCATTGCCAATGTAAGTGTGGAAGCGTGCACAATCTCAATAAGGAGGGGGGATTTCTGTAACAGTACAGTTTATCCACTTTCATGCACAGCATCTAATATCAATAATGCTTTGGAGGCTACTGTGAACAAGTCAACGTTGGAAAATCCAATGACCTGCAAAAGTAATTTTGAAACTCTGTGTGTTCATGAAGGTGTACCAACCTTCTTCTCCTTGGAGATAATGAATGTGGCAGAAGAATTTACCATTACTGCAACAAATGTCAGATTCAATGTTACATCATCAAATAACATTTCTGGTGCAAATGATTTTAGTTTAGTTTGTTTTGTTCGCCATGGTGCAATGCCTTCAGCAACTTTACATGATTATTCTGTTGATTTAAATAAAAAACCCCTTGTTATTCATTCACCATTAATTGGTCGTTGGTACCTTAGTATAGTTCTAGTCAATCTTACAAAGACTCATGATAACAATGTAAGAGTTTGCTATTCAGTGGAATCTCAAGTGCTTCAGTGCCTACCTGGGAAAGCTGGACCAAATTGTACGATGGATAGCTACTTGCTTCAGACATTTCTAAGAAAAGGTTCAACCCCTTTTGAATCATATTATTTACCAGTTGGTGGAGGAGCATCTTATGATTCTGCCAATTTCCCTCTCGAGTCACTTATAAGAAACTCATCATACATTGGAGAACCTGATAACATTTGGACTTACTTTCTTTTGGATATTCCTCGTGGTGCAGCTGGAGGAAATCTTCACATACAGCTATCATCAGATGTGAAGATCAGTTATGAAGTTTATGCTAGATTTGGTGGATTACCATCACTTGATATCTGGGACTATTATTATGCTAACAAGACAAATAGAAGTGACCCATCTATGTTTTTCACGCTATATGATTCAAGTGATGAGAAGGTTAATTTTTATATTATGTATGCTAGAGAAGGAACTTGGGGTTTTGGTGTAAGACATCTTAATACCAGCAGTGATTCTGCAAAAGGGCAAACTATCATGTCTCTTTCACTTGAACGATGCCCAAAACGATGTTCTTCTCATGGAGAATGCAAATTTTCTTTTGATGCCAGTGAATTGACATCATACAGCTTCTGCTCTTGTGATCGAAACCATGGGGGCTTTGACTGTAGCATTGAAATTGTAACACATCAAGGGCATGTCCGGCAATCAATTTTTCTTATTATATCAAATGCTGCAGCCATACTTCCTGCCTATTGGGCTCTTCGGCAGAAGGCATTAGCAGAATGGGTTTTATACACATCCAGTGGAATTTCAAGTGGACTATATCATGCATGTGATGTAGGTACCTGGTGTGCATTGAACTATAATGTCTTACAGTTCATGGACTTCTGGCTCTCTTTCGTGGCTGTGATTAGCACTTTTCTTTATCTAGCTACCATTGATGAAGTGTTTAAGAGAGCAATCCACACAGCTATTGCTATCCTTACTGCCCTTATGGCTGCTACAAAAGCAACCAGGTCTTCCAATGTTGTTCTTGTGATTGTGATTGGTGCTCTTGGTCTCCTTATTGGATGGTTGATAGAGATCTCAACAAAATATAGGTCCCTTTCCTTTCCAATAGGAGTCTCTCTTAATATCTCTCACTGTTTCCAAACTGTAAAGAGGTGGCTCTATAATGTTGTCAAGACACTTCTGAGACGGTACCGCTGGCCTTTTGCCTTGGTTGGTTTTGCTGCATTGGCCATGGCAGCAATAAGCTGGACACTTGAAACCAGTGAAACCTACTGGTTTTGGCATAGCTTTTGGCACATTACAATATACACATCTTCCTTCTTCTTCCTTTGTTCTAAAGTAAATAATGTGGATAGTGACAATCAGCTTTCTACAAATGGAAACTATGAAATGACTCGTCAGGATTCACTTCCAAGAAGTGGTTAG 2448 0.3954 MAFNLISWLHPISVLSVLVLFFYSFGLFSANDEVGTVEGETFTVSSFSYPETRLRPFDLRYIRVDLPPWFSAMSVALNSDVDLDVSKIERVPMSTLPIICFRDGSPPLPDALNTSLKDSAISGINGLDVEQCFPMQKNITMKLSNNQISPGVWYIGLFNGIGPTRTQSKMIIRGPSYSFIANVSVEACTISIRRGDFCNSTVYPLSCTASNINNALEATVNKSTLENPMTCKSNFETLCVHEGVPTFFSLEIMNVAEEFTITATNVRFNVTSSNNISGANDFSLVCFVRHGAMPSATLHDYSVDLNKKPLVIHSPLIGRWYLSIVLVNLTKTHDNNVRVCYSVESQVLQCLPGKAGPNCTMDSYLLQTFLRKGSTPFESYYLPVGGGASYDSANFPLESLIRNSSYIGEPDNIWTYFLLDIPRGAAGGNLHIQLSSDVKISYEVYARFGGLPSLDIWDYYYANKTNRSDPSMFFTLYDSSDEKVNFYIMYAREGTWGFGVRHLNTSSDSAKGQTIMSLSLERCPKRCSSHGECKFSFDASELTSYSFCSCDRNHGGFDCSIEIVTHQGHVRQSIFLIISNAAAILPAYWALRQKALAEWVLYTSSGISSGLYHACDVGTWCALNYNVLQFMDFWLSFVAVISTFLYLATIDEVFKRAIHTAIAILTALMAATKATRSSNVVLVIVIGALGLLIGWLIEISTKYRSLSFPIGVSLNISHCFQTVKRWLYNVVKTLLRRYRWPFALVGFAALAMAAISWTLETSETYWFWHSFWHITIYTSSFFFLCSKVNNVDSDNQLSTNGNYEMTRQDSLPRSG* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2255 815 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 17 814 IPR021910 GO:0016021
Apr4g2255 815 Pfam Protein of unknown function (DUF3522) 569 774 IPR021910 GO:0016021
Apr4g2255 815 ProSitePatterns EGF-like domain signature 1. 548 559 IPR000742 -
Apr4g2255 815 PANTHER TRANSMEMBRANE PROTEIN-LIKE PROTEIN 17 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2255 Apr-Chr4 31582176 31591738 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2255 - - gmx:100778959 1418.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2255 4 31582176 31591738 Apr10g1313 10 25462322 25470814 PCT