Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1313 ATGTCTTTGAATTCGATTCTGTGTTGTCATCTCAACCTGATTCTTCTCAGTGCTTTGGTACTTTTTTGTTGTTCTCTTGGCCACTGCACTGCAAACGATGATGAACTGGGAGCCACTGAAGATAACATCTTCACTGTTTCCAGCTTCAGCTACCCTGAAACTGCCATCAGACCTTTTGATTTGCGCTATATCAGAGTGGACATACCACCGGGGTTTTCTGCAGTATCCATAGCGTTGAACTCAGATGTAGACCTTGATATTGCAAGAGTTGAAAGGGTTCCAGAAAGCGCACTTCCAATTATATGCTTTAGAGATGGCAGCCCACCTCTACCAGATGCTTTAAACACATCTCTGAAAGATTCAGCTGTCAAAGGAATAAATGGTCTTGATGTTGAGCAGTGCTTTCCTATGGAGAAAAATATCACTATGAAATTGACAAATGAACAGATATCTCCAGGTGCTTGGTACATTGGTCTTTTCAACGGCATTGGACCTACAAGAACACAATCAAAGATGATTATCCGAGGGCCATCATACTCTTTTAGTGCCAATATAAGCGTGGAAGCATGCACAAATTCAATGATGAGGGGGGAATTCTGTAACAGTACAGTCTATCCACTTTCATGCACAACATCTGATGTCTATAATTCTATGAAGGCTACAGTTCAGAAGCCAATGATGGAAAATGCAATGGCCTGCAAAAGTAATTTTGAAGCATTTTGTGTTCAGGAAGGTGTACCAAACTTTTACTCCTTGGATATTGCAAATGTGGCAGAAGAATTGACTATTATGGCAGCAAATGTCAGATTCAATACTACATCTTCAAATAACGCATCTGGTGTTTATGATGTTAAATTAATGTGTTTTGCTCGCCATGGTGCAATTCCTTCAGAGACTTTGCATGACTATTCCATTGATTTAAATAAATCCCCTTTGGTTATCCATTCTCCATTGCTTGGTCGTTTGTACATTAGTATTTTACCAGTTAATCTTACAAAGAAGTTGGGAGGGACTCTGGATGACAATTTAAGGATTTGCTATTCAATAGAATCGCAAATACTTCAGTGCCCGCTTGGGAAAGCTGGAGCAAATTGCACAATGGACAGCTACACACTTCAGACAGTTCTAAGGAGAGGTCCAACCCCATTTGAATCATATTATTTACCTGTTGGTGAGGGAGCATCTTCTGCCAATTTTCCTCTTGAGCCACTTTCAAACAAGTCATCAAATGGAGGAGAAACTGATGACATTTGGACTTATTTTATTTTGGAAATCCCTCGTGGTGCAGCTGGAAGAAATATTCACATACGGCTATCTGCAGACGTGAAGATCAGTTATGAAGTTTATGCTAGATTTGGTGGATTGCCTTCTCTTGATAGCTGGGACTACTACTATGCTAACAATACAAGGAAGAGTGAACAATCTGTGTTTTTTATGCTATATGATTCGAGTGATGACAAAATTGATTTCTACATTATATATGCTAGAGAAGGAACTTGGGGTTTGGGTCTAAGACAACTTAATACCAACAGTGTTTATGTGAAAGGGCAAACTGTCATGTCTATTTCACTTGAAGGATGCCCAAAACAGTGCTCCTCTAATGGAGACTGTAAATATTCTTTTGATGCTAGTGGATTGACATCATACAGCTTCTGTTCTTGTGATCGAAACCATGGTGGCTTTGACTGTAGTATTGAAGTTGTATCACATAAAGGGCATATAATGCAATCAATATTTCTCATTGGATCGAATGCTGCGGCCATACTTCCTGCCTATTGGTCCCTTCGGCAGAAGGCATTTGCAGAATGGGTTTTATTCACATCAAGTGGAATTGCAAGTGCGCTATATCATGCATGTGACGTAGGCACATGGTGTCCATTGACCTTTAATGTTTTACAGTTCATGGACTTTTGGCTCTCTTTCATGGCTGTGGTTAGCACTTTTGTATACCTTGCTACCATTGATGAAGTATATAAGAGAGCAATCCACACAGCTGTTGCTATACTTACTGCTCTCATGGCTGCAACCAAGGCAACCAGGTCTTCCAATATTGTTCTTGTCATTGTGATCGGGGCTCTTGGTCTTCTTGTTGCATGGTTGATAGAAATCTCAACAAAGTATAGGTCCCTTTCCTTTTCATTTGGATTCTCCCAAAGTTTCCTTCAAAGTTTGCAAACTATAAAGCAATGGTTCTGTAATCTTGTCAAGACAATTTTGAGACGGTTTCGCTGGGGGTTCTTATTGGTCGGTTTCATTACATTGGCCATGGCAGCAATAAGTTGGACACTTGAAACCAGTGCAAACTACTGGTTTTGGCATAGCTTTTGGCATGTCACAATATACACATCTTCTTTCTTCTTCCTTTGTTCAAAAGCAAACATTGTGGATGCTGAGAATCAGCTACCTACAAATGCAAACTATGCGCTGACTCGTCAGGATTCATTTCCAAGAGATAATTAG 2460 0.4004 MSLNSILCCHLNLILLSALVLFCCSLGHCTANDDELGATEDNIFTVSSFSYPETAIRPFDLRYIRVDIPPGFSAVSIALNSDVDLDIARVERVPESALPIICFRDGSPPLPDALNTSLKDSAVKGINGLDVEQCFPMEKNITMKLTNEQISPGAWYIGLFNGIGPTRTQSKMIIRGPSYSFSANISVEACTNSMMRGEFCNSTVYPLSCTTSDVYNSMKATVQKPMMENAMACKSNFEAFCVQEGVPNFYSLDIANVAEELTIMAANVRFNTTSSNNASGVYDVKLMCFARHGAIPSETLHDYSIDLNKSPLVIHSPLLGRLYISILPVNLTKKLGGTLDDNLRICYSIESQILQCPLGKAGANCTMDSYTLQTVLRRGPTPFESYYLPVGEGASSANFPLEPLSNKSSNGGETDDIWTYFILEIPRGAAGRNIHIRLSADVKISYEVYARFGGLPSLDSWDYYYANNTRKSEQSVFFMLYDSSDDKIDFYIIYAREGTWGLGLRQLNTNSVYVKGQTVMSISLEGCPKQCSSNGDCKYSFDASGLTSYSFCSCDRNHGGFDCSIEVVSHKGHIMQSIFLIGSNAAAILPAYWSLRQKAFAEWVLFTSSGIASALYHACDVGTWCPLTFNVLQFMDFWLSFMAVVSTFVYLATIDEVYKRAIHTAVAILTALMAATKATRSSNIVLVIVIGALGLLVAWLIEISTKYRSLSFSFGFSQSFLQSLQTIKQWFCNLVKTILRRFRWGFLLVGFITLAMAAISWTLETSANYWFWHSFWHVTIYTSSFFFLCSKANIVDAENQLPTNANYALTRQDSFPRDN* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1313 819 PANTHER TRANSMEMBRANE PROTEIN-LIKE PROTEIN 15 818 - -
Apr10g1313 819 Pfam Protein of unknown function (DUF3522) 573 778 IPR021910 GO:0016021
Apr10g1313 819 ProSitePatterns EGF-like domain signature 1. 552 563 IPR000742 -
Apr10g1313 819 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 15 818 IPR021910 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1313 Apr-Chr10 25462322 25470814 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1313 - - gmx:100777848 1408.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2255 4 31582176 31591738 Apr10g1313 10 25462322 25470814 PCT