Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2233 ATGGATAAATCATCAAACTTTGATGAAAATTCTGATGTGGGTTATCACCCTTCACCTTCTGATACTCTTGCTTTTTCCACATTGAGTGGAGATTCTTTTCAATTATGCCAAAACTGGACAAGCTCAGAGTCAGAGACTGTAGATGATAGCAGCTATGCTAGTGAACCTTCACCTTCTCGCTGGACGGCGCTTAAACCCGGGGCTAAACAGGTTATTCTTTCAAAACTAGGAATGAAACTGCGCAAGCCTTCAATGGATGATAAACTTAGTGGCGGCGATCTCTTGGATTCAGCTGAGCTTGACATGATGAAGGAAAGATTTGCAAAGCTTCTGCTGGGAGAAGACATGTCTGGTAGCGGGAAAGGAGTTTGCACTGCAGTTACAATCTCAAATGCCATTACCAATCTCTATGCAACTGTATTTGGACAAAGTTTGAAATTGGAACCACTAAAGCCTGAGAAAAAGGCTATGTGGAAAAGGGAAATGAAGGTTCTTCTATCAGTGTGTGATTACATACAAGAATTTGCTCCAACTGCACAGTATTTAGAAGATGGCACAATTGTGGAGATGATGAAAAGCAGGCCAAGGTCAGACATCTATATCAACCTTCCTGCACTACAGAAGCTTGACACAATGCTCATAGAAATATTAGATACTTTCGAGGATAGTGAATTTTGGTATGCAGAGAACATATCAGGGAATTCAAATCGATTACGTGCAGCCTCGTTTCGAAGGATTGTTCCAAGGAAAGATGAGAAATGGTGGTTGCCAGTTCCTTGTGTTCTCCCTGGTGGCCTCTCTGACAAGTCAAGAAAGCATTTGATAGAGAAAAGGGATTGTGCTAATCAAATTCATAAAGCAGCCATGGCAATAAATAGCAATGTTCTTGCAGAAATAGACATCCCAGAAACATATATTGATAACCTTCCCAAGAGTGGACGATCAAGTATAGGGGACACGATTTACCACTATATGTACAATGCAGACAAGTTCTCACCTGAAAACCTTCTTGACTGTCTCAAAATAAGTTCTGAACATGAAGCACTTGAGCTAGCAGACAGGGTTGAATCATCAATGTACTCATGGAGACGTAAAGCTTGTCTAAGCCATGCAAAGACATCATGGAACAAAGTAAAGGATCTCATGGCTGAGACAGACTATAAGGACAAAAACTACATCTTAGCTGAGAGAGCTGAGACTTTATTGTTGTGCCTGAAGCTAAGATATCCTGAACTTTCACAAACTTCTTTGGATACATGCAAGATCCAATACAACCGGGATGTAGGGAAATCAGTACTAGAGAGTTATTCAAGAGTTTTGGAAGGCCTGGCATTCAACATTGTAGCTTGGATTGAAGATGTTCTTTATGTAGATAATTCAATGAGAAATCGAGATGTATAG 1401 0.4047 MDKSSNFDENSDVGYHPSPSDTLAFSTLSGDSFQLCQNWTSSESETVDDSSYASEPSPSRWTALKPGAKQVILSKLGMKLRKPSMDDKLSGGDLLDSAELDMMKERFAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQSLKLEPLKPEKKAMWKREMKVLLSVCDYIQEFAPTAQYLEDGTIVEMMKSRPRSDIYINLPALQKLDTMLIEILDTFEDSEFWYAENISGNSNRLRAASFRRIVPRKDEKWWLPVPCVLPGGLSDKSRKHLIEKRDCANQIHKAAMAINSNVLAEIDIPETYIDNLPKSGRSSIGDTIYHYMYNADKFSPENLLDCLKISSEHEALELADRVESSMYSWRRKACLSHAKTSWNKVKDLMAETDYKDKNYILAERAETLLLCLKLRYPELSQTSLDTCKIQYNRDVGKSVLESYSRVLEGLAFNIVAWIEDVLYVDNSMRNRDV* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2233 466 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 99 462 IPR005512 GO:0005085
Apr4g2233 466 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 311 466 - -
Apr4g2233 466 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 1 311 - -
Apr4g2233 466 MobiDBLite consensus disorder prediction 43 62 - -
Apr4g2233 466 MobiDBLite consensus disorder prediction 1 21 - -
Apr4g2233 466 Gene3D PRONE domain, subdomain 1 332 466 - -
Apr4g2233 466 Gene3D PRONE domain, subdomain 1 95 331 - -
Apr4g2233 466 ProSiteProfiles PRONE domain profile. 90 466 IPR005512 GO:0005085
Apr4g2233 466 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 311 466 IPR038937 GO:0005085
Apr4g2233 466 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 311 IPR038937 GO:0005085
Apr4g2233 466 MobiDBLite consensus disorder prediction 43 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2233 Apr-Chr4 31334125 31336986 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2233 - - gmx:100806086 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2233 4 31334125 31336986 Apr4g2233 4 31334125 31336986 ECH
Apr4g2233 4 31334125 31336986 Apr10g1332 10 25670546 25673746 PCT