Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1332 ATGGACAATTCATCCAACTTTGATGAAAACTCTGATGTGGGGTATCAACCTTCACCTTCTTCTGTGGATCAAAATGATCATTCAGTCACGGAAACTGCTGGATACTCTCCATTCAGTGGTGATTCCTTTGCATATTGCCGTACTAACTCTGAGGTCTCAAACTTCTCTGAGGCTATTGATGACAATAGCTATGCAAGTGAACCTTCACCTTCTGTATGGACAGCTATAAAACATGGAGGTAGTCATGCTGCTCTTTCCAGGTTAGGAATGAAGCAGCATAGGCATTCATTGGATGATAAACATGATGATGACCTTGATCTCTTGGAGTCAGAGCTTGAAACGATGAAGGAAAGATTTGCAAAGCTTCTGTTGGGGGAAGATATGTCTGGTGGTGGGAAAGGAGTATGTACTGCAGTTACAATATCAAATTCAATTACCAATCTCTATGCAACTGTATTTGGACAAAATTTAAAGTTGGAGCCTCTGAAGCCTGAGAAGAAGGCTATGTGGAAAAGAGAAATGAATTGTCTCCTATCTGTGTGTGATTACATAGTAGAATTTGCCCCAACTGCACAATACTTAGAAGATGGCACAATTGTGGAGATGATGACAAGTAGATCAAGATCAGATATTTATATCAACCTTCCAGCTCTACAGAAGCTTGACACAATGCTCATAGAAATATTGGATAGTTTCCATGATACTGAATTTTGGTATGCTGAACAAGGGAGCATATCAGGGAATTCGTCTCGGTCACGGGCAGGCTCATTTCGTAGAATTGCTCAAAGGAAAGATGAGAAATGGTGGTTGCCAGTTCCTTGTGTTCACCCTGGTGGCCTCTCTGACGAGTCAAGTAAGCACTTGAGTGAGAAGAGAGACTGTGCTAATCAAATTCATAAAGCAGCTATGGCAATAAATAGCAGTGTTCTAGCAGAAATGGATATCCCAGAAACATATTTGGCAAATCTTCCCAAGAGTGGAAGAGCAAGTCTTGGGGACCCAATTTACCGCTATATGTATTCTGCAGACAAGTTCTCACCTGAATACCTTCTTGATTGTCTCAAAATAAGTTCTGAACATGAAGCACTTGAGCTGGCAGATAAGGTCGAATCTTCAATGTTCACTTGGAGGCGTAAATCATGTCTGAGCCATTCAAAAACATCATGGAACAAAGTTAAGGATCTCATGGCTGACACTGACAGAAGTGACAAAAACTACATCTTAGCTGAGAGAGCTGAGACTCTCTTGTTTTGCTTGAAGCAAAGATACCCTGAACTTTCTCAAACATCATTGGACACATGCAAGATTCAATACAACCGGGATGTTGGGAAAGCAATATTAGAAAGCTACTCAAGAGTATTAGAAGGCTTAGCATTCAACATTGTAGCTTGGATTGAAGATGTTCTTCATGCAGATAAATCAATGAAGAACCAAAATGTATAG 1443 0.4047 MDNSSNFDENSDVGYQPSPSSVDQNDHSVTETAGYSPFSGDSFAYCRTNSEVSNFSEAIDDNSYASEPSPSVWTAIKHGGSHAALSRLGMKQHRHSLDDKHDDDLDLLESELETMKERFAKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLKPEKKAMWKREMNCLLSVCDYIVEFAPTAQYLEDGTIVEMMTSRSRSDIYINLPALQKLDTMLIEILDSFHDTEFWYAEQGSISGNSSRSRAGSFRRIAQRKDEKWWLPVPCVHPGGLSDESSKHLSEKRDCANQIHKAAMAINSSVLAEMDIPETYLANLPKSGRASLGDPIYRYMYSADKFSPEYLLDCLKISSEHEALELADKVESSMFTWRRKSCLSHSKTSWNKVKDLMADTDRSDKNYILAERAETLLFCLKQRYPELSQTSLDTCKIQYNRDVGKAILESYSRVLEGLAFNIVAWIEDVLHADKSMKNQNV* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1332 480 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 324 480 - -
Apr10g1332 480 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 1 325 - -
Apr10g1332 480 ProSiteProfiles PRONE domain profile. 102 480 IPR005512 GO:0005085
Apr10g1332 480 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 110 476 IPR005512 GO:0005085
Apr10g1332 480 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 324 480 IPR038937 GO:0005085
Apr10g1332 480 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 325 IPR038937 GO:0005085
Apr10g1332 480 Coils Coil 98 118 - -
Apr10g1332 480 Gene3D PRONE domain, subdomain 1 347 480 - -
Apr10g1332 480 Gene3D PRONE domain, subdomain 1 105 346 - -
Apr10g1332 480 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1332 Apr-Chr10 25670546 25673746 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1332 - - gmx:100785956 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1332 10 25670546 25673746 Apr10g1332 10 25670546 25673746 ECH
Apr4g2233 4 31334125 31336986 Apr10g1332 10 25670546 25673746 PCT