Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2232 ATGGCAAACTTCAAATCTCATGCTGACATTCCCATTTTAGACATTTCTCAACCATTGCAGCCATCTTCTCTATCTTTCCTCTCAAAGGCCAGCAAAGATTGGGGATTTTTCCACATAATCAACCATGGAATCGCCAAAGATCTTTGCAGCCAGCTCCACTCACTATCCAAACACCTCTTCAGTCTCCCTTATGAAACTAAGCTTAGAATTGGTCCCTTTTCTTCTTTAAAATCTTACACCCCTCATTTCATTGCCTCTCCATTCTTTGAAAGCCTCCGAGTTAATGGACCCAACTTTTATGCTTCTGCTAATAGTTCTGCTGAAATCCTCTTTGACAAACAGGATTCCAAATTCAGTGTGATGCTGGAAGAATATGGCTGTAAGATGGAAGATTTGTCTAAGAAAATTCTAAAGATGGTGTTGATGGGCCTAGGGGATGGCATTGAGAAGAAGTTTTATGATTCTGAGTTCAAAAAGTGCCATGGTTACTTGAGGATAAACAATTATTCTGGCCCAGAAAGTATGGTAGATCAAGTTGAAGGGCTTGGAATGCACACTGATATGAGTTGTATTACCATCCTATATCAAGATGAAATAGGAGGGCTTCAAGTGAGATCAAATGAGGGAGAATGGATAGATATCTTACCCTCTGAGGGTACCCTAGTGGTGAACATAGGAGATATGTTACAAGCTTGGAGCAATGACAAATTAAGGTCCTCAGAACATAGAGTTGTTTTGAAGCATCATGTTAACAGATTTTCTTTAGCATTCTTCTGGTGCTTTGAGGATGACAAGGTGATTTTGGCACCAGATGAGGTTGTTGGAGAAGGAAACAAGAGGAAGTACAAGCCATTTGTGTGCTTTGACTATTTGAAATTTAGAGAGAACAATGAAAGAGGAAGATTTGATAAGGTGGGGTTCACAGTTAGAGATTTTGCTGGCATCAAGGCTCAGTTGTAA 960 0.399 MANFKSHADIPILDISQPLQPSSLSFLSKASKDWGFFHIINHGIAKDLCSQLHSLSKHLFSLPYETKLRIGPFSSLKSYTPHFIASPFFESLRVNGPNFYASANSSAEILFDKQDSKFSVMLEEYGCKMEDLSKKILKMVLMGLGDGIEKKFYDSEFKKCHGYLRINNYSGPESMVDQVEGLGMHTDMSCITILYQDEIGGLQVRSNEGEWIDILPSEGTLVVNIGDMLQAWSNDKLRSSEHRVVLKHHVNRFSLAFFWCFEDDKVILAPDEVVGEGNKRKYKPFVCFDYLKFRENNERGRFDKVGFTVRDFAGIKAQL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2232 319 Pfam 2OG-Fe(II) oxygenase superfamily 165 259 IPR044861 -
Apr4g2232 319 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 312 - -
Apr4g2232 319 Gene3D - 2 293 IPR027443 -
Apr4g2232 319 SUPERFAMILY Clavaminate synthase-like 6 297 - -
Apr4g2232 319 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 73 IPR026992 -
Apr4g2232 319 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 5 312 - -
Apr4g2232 319 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 262 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2232 Apr-Chr4 31328683 31329961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2232 6 290 Glycosyltransferase AT5G59530 29.545 1.75e-22 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2232 - - gmx:100812108 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2232 4 31328683 31329961 Apr4g2232 4 31328683 31329961 ECH
Apr4g2232 4 31328683 31329961 Apr10g1335 10 25691659 25692714 PCT