Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1335 ATGTCTAAGTTTGAATATGTTGAGCTTCCGATTTTAGACATTTCTCAGCCATTAGAGTCATCTTCCTTGACCTCTCTCTCTAAAGCATGCAAAGATTGGGGATTTTTCCACATAATCAATCATGGAATCTCCAAAGATCTTTGCAACCAGATCCATTCATTATCCAATTACCTCTTCAACCTCCCTTCTGAGACTAAACTTAAACTCGGTCCTTTCTCCTCTATAAAATCATACACTCCTCACTTCATTGCTTCTCCATTTTTTGAGAGCCTCAGAATTAATGGACCAAACTTCTATGCTTGTGCTAAGAGTTCTGAAGACATCCTCTTTGACAAACACAATTCCATATTCAGTGAGACACTGCAGGAATATTGTAGTAAGATGGCTGATTTGTGTGAGAAAATTCTAAAGCTTGTGCTGATGAGTTTAGGGGATGGCTTTGACAAGTTGTTTTATGATTATGAATTTAAGAGGTGTCATGGTTACTTGAGGATAAACAACTATTCTGCTCTAGAAAGTTTGGAAGACCAAGTCGAGGGGCTTGGAATGCACACTGATATGAGTTGTATTACTATCTTATATCAAGATGAAATAGGAGGGCTTCAAGTGAGATCACATGAAGGCAAATGGATAGACATAAGCCCTTCTGAAGGGACCCTAGTGGTGAACATAGGGGATATGATGCAAGCTTGGAGCAATGATAAGTTAAGGTCTTCTGAACATAGAGTTGTTTTGAAGCAAACTGTGAACAGATTTTCTTTAGCTTTCTTTTGGTGCTTTGAGGATGAGAAAGTGGTGTTGGCACCAGATGAAGTTGTTGGAGAAGGAAACAAGAGGATGTACAATCCATTTGTGTGCTTAGACTATTTGAAATTCAGAGAGAATAATCAAAGAGGAAGGTTTGAAAAGGTAGGGTACACAGTTAGAGATTTTGCAGGCATCAAGTCTCAACTGTAA 957 0.3856 MSKFEYVELPILDISQPLESSSLTSLSKACKDWGFFHIINHGISKDLCNQIHSLSNYLFNLPSETKLKLGPFSSIKSYTPHFIASPFFESLRINGPNFYACAKSSEDILFDKHNSIFSETLQEYCSKMADLCEKILKLVLMSLGDGFDKLFYDYEFKRCHGYLRINNYSALESLEDQVEGLGMHTDMSCITILYQDEIGGLQVRSHEGKWIDISPSEGTLVVNIGDMMQAWSNDKLRSSEHRVVLKQTVNRFSLAFFWCFEDEKVVLAPDEVVGEGNKRMYNPFVCLDYLKFRENNQRGRFEKVGYTVRDFAGIKSQL* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1335 318 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 159 261 IPR005123 -
Apr10g1335 318 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 311 - -
Apr10g1335 318 Pfam 2OG-Fe(II) oxygenase superfamily 165 258 IPR044861 -
Apr10g1335 318 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 77 IPR026992 -
Apr10g1335 318 Gene3D - 2 292 IPR027443 -
Apr10g1335 318 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 5 311 - -
Apr10g1335 318 SUPERFAMILY Clavaminate synthase-like 4 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1335 Apr-Chr10 25691659 25692714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1335 7 289 Glycosyltransferase AT5G59530 26.780 7.61e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1335 - - gmx:100782766 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2232 4 31328683 31329961 Apr10g1335 10 25691659 25692714 PCT