Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2229 ATGGCGAAGGAAGAAGTATTTGAGTTCCTCGGGAACGTTCCCCTGCTACAGAGACTTCCTGGTTCGTCTGTACGGAAGATATCTGAACTTGTGATTCTCAAACACTATGGGCCAGGAGAGTATGTTGTTCGTGAGGGTGAACGTGGGGATGGTCTTTACTTCATTTGGGATGGAGAGGCTGAAGTTGTTGGCTCTGTTAGCACGGATGAAGAAAATCATCCAGAGTTTCAATTGAAAAGATATGACTATTTTGGTTTTGGTTTATCAAATGCAGTTCACCATGCTGATGTTGTAGCTTCGACAAAGCTATCATGCTTAGTGCTGCCCCATGAGCACTCAGCACTGCTGCAGCCAAAATCTATCTGGAGTGCAGAAAAATCTCTTGATACATGCTCAGCTGTGGAGCATATATTACATTTGGAACCCATAGAGATATCTTCCGAGGAATCACCCCTCCTGATGCTCCAAAATTTGGGAAGGTATTTGGGGGGCAGATTGTTGGACAGGCATTGGCTGCAGCATCAAAATCTGTTGACTGTCTCAAAGTTGTTCATAGCTTGCATGCCTATTTTCTTCTCGTGGGGGATTTTAATAAGCTTTGCTACAAGGAAAGTGGATGCAATTCAGAAAGGAAATGTCATATTCACTTTGCTGGCTTCATTTCAGAAGGAAGAATTAGGGTTTCACCACCAGGAAGTGTCTATCCCATCAGTCCCTGCTCCAGACACGCTTTTATCAATGGAAGAGTTACGGGAGCAACGTCTTACTGACCCTCGTCTTCCAAGAACCTACCGGAACAAGGTTGCTACAACTGAATTCATTCCATGGCCAATAGAGATACGATTCTGTGAACCTAAAGCTTCAACAAATCAGACCAAATCTCCTCCTAGCTTGAGATACTGGTTTAGAGCAAAGGGAAAACTTTCAGATGATCCGGCCTTGCATAGGTGTGTGGTAGCATATGCTTCAGATCTAATCTTTCTTCAAGTGAGTTTGAATCCCCACCGCAGGAAGGGCATGAAGGCACGAGCTGTGAGTCTGGACCACACCATGTGGTTTCACAGACCTTTAAGAGTTGATGACTGGGTGCTATTTGTGATCTTTAGCCCTAGTGCCTCTAATGCACGCGGCTCTGTCTCTGGCCAAATGTTCAATCAGAAGGGAGAGCTTCTTGTATCATTGGTTCAAGAGGGTCTAGTGAGGAAGGTTAATTCTGCAAATTCAGCCATCAAATCTAATCTGTGA 1245 0.4458 MAKEEVFEFLGNVPLLQRLPGSSVRKISELVILKHYGPGEYVVREGERGDGLYFIWDGEAEVVGSVSTDEENHPEFQLKRYDYFGFGLSNAVHHADVVASTKLSCLVLPHEHSALLQPKSIWSAEKSLDTCSAVEHILHLEPIEISSEESPLLMLQNLGRYLGGRLLDRHWLQHQNLLTVSKLFIACMPIFFSWGILISFATRKVDAIQKGNVIFTLLASFQKEELGFHHQEVSIPSVPAPDTLLSMEELREQRLTDPRLPRTYRNKVATTEFIPWPIEIRFCEPKASTNQTKSPPSLRYWFRAKGKLSDDPALHRCVVAYASDLIFLQVSLNPHRRKGMKARAVSLDHTMWFHRPLRVDDWVLFVIFSPSASNARGSVSGQMFNQKGELLVSLVQEGLVRKVNSANSAIKSNL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2229 414 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 233 402 IPR029069 -
Apr4g2229 414 PANTHER ACYL-COA THIOESTERASE 51 146 - -
Apr4g2229 414 PANTHER ACYL-COA THIOESTERASE 199 414 - -
Apr4g2229 414 Pfam Cyclic nucleotide-binding domain 34 111 IPR000595 -
Apr4g2229 414 ProSiteProfiles cAMP/cGMP binding motif profile. 15 85 IPR000595 -
Apr4g2229 414 Gene3D - 198 403 IPR042171 -
Apr4g2229 414 Pfam Thioesterase-like superfamily 199 400 - -
Apr4g2229 414 PANTHER ACYL-COA THIOESTERASE 51 146 IPR003703 GO:0006637|GO:0047617
Apr4g2229 414 PANTHER ACYL-COA THIOESTERASE 199 414 IPR003703 GO:0006637|GO:0047617
Apr4g2229 414 SMART cnmp_10 15 132 IPR000595 -
Apr4g2229 414 CDD CAP_ED 15 112 IPR000595 -
Apr4g2229 414 SUPERFAMILY cAMP-binding domain-like 4 112 IPR018490 -
Apr4g2229 414 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 42 58 IPR018488 -
Apr4g2229 414 CDD Thioesterase_II_repeat1 298 400 - -
Apr4g2229 414 Gene3D Jelly Rolls 2 123 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2229 Apr-Chr4 31291683 31297627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2229 1 414 Acyl Lipid Metabolism Gene Families AT1G01710 56.591 3.35e-174 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2229 K01068 - gmx:100805018 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2229 4 31291683 31297627 Apr4g2229 4 31291683 31297627 ECH
Apr4g2229 4 31291683 31297627 Apr10g1337 10 25704837 25713520 PCT