Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1337 ATGTCTTGCGATAAAATAAAACTGAAGAAAGCAGAATTGAGTTCGTTCTGCGAGAAATGGAAAAAGAAGAAGAGGATTCCTAGCTCGTCTGTGAGGAAGATATCTGAAGTTGTGGTTGCCAAACACTACGAGCCTGGAGAGTATGTTGCTCGTGAGGGTGAACCTGGGGATGGCGTATACTTCATATTGGATGGAGAGGCTGAGGTTGTTGGATCTGTCAGTACCAATGATGAAAATCGCCCGGAGTTCCAATTGAAAAGATATGATTATTTTGGTTATGGTTTGTCAAACACAGTTCACCAGGCAGATGTTGTTGCTCTGTCTAAGCTGACATGCTTCGTGCTGCCCAATGAGCACTCAACACTGATGCAGCCGAAGTCTATCTGGAGTGCAGAAAATTGTGTTGAGACATGCTCACCTGTGGAGAATATTTTGCATTTAGAACCCATAGAGGTAGATGTCTTCCAAGGAATAACCCTTCCAGATGCTCCTAGATTTGGGAAAGTGTTTGGGGGACAGATGATTGGACAGGCACTGGCTGCAGCAGCAAAATCTGTTGACTGTCTTAAGGTTGTTCATAGTTTGCATGCCTATTTTATTCTAGTGGGGGATTTAAACATGCCAATTATATATCAAGTTCACCGTCTCCGTGACGGAAAGAGCTTTGCTACACGGAAAGTGGATGCAATTCAAAAGGGGAATGTCATATTCACTTTGCTGGCTTCATTTCAGAAGGAAGAATCAGGGATGTACCACCAGGAAGTAGCTATGCCATCTGTCCCGGCTCCAGATATGCTTCTGCCAATGGAAGAGTTACGCGAGAGACGTCTTACTGACCCTCGTTTACCAATAACCTACCGGAGCAAAGTGGCTACAACTCAATTCATCCCCTGGCCCATAGAGATACGGTTCTGTGAATATGAACTTTCAACAAATCAGACAAAATCCCCTCCCAGTTTGAGATACTGGTTTAGAGCAAAGGGAAAACTGTCAGATGATCAAGCATTGCATAGGTGCGTGGTGGCATATGCTTCAGATCTAATATTTCTTCAAGTAAGTTTGAATCCCCACCGTGAGAAGGGCTTCAAGACACGTTCTGTTAGTCTGGACCACTCTTTGTGGTTTCACCGATCCTTAAGAGCAGATGAATGGGTGCTATTTGCAATCTTTACGCCTTCAGCCTATAATGCTCGTGTCTTTGTCACAGGCCAAATGTTCAATCAGAAGGGAGAGCTTCTTGTATCATTGGTTCAAGAAGGACTAGCCAGGAAAATTAATCCCGGAAATTCAGCCATCAAATCCAAGTTGTGA 1311 0.4401 MSCDKIKLKKAELSSFCEKWKKKKRIPSSSVRKISEVVVAKHYEPGEYVAREGEPGDGVYFILDGEAEVVGSVSTNDENRPEFQLKRYDYFGYGLSNTVHQADVVALSKLTCFVLPNEHSTLMQPKSIWSAENCVETCSPVENILHLEPIEVDVFQGITLPDAPRFGKVFGGQMIGQALAAAAKSVDCLKVVHSLHAYFILVGDLNMPIIYQVHRLRDGKSFATRKVDAIQKGNVIFTLLASFQKEESGMYHQEVAMPSVPAPDMLLPMEELRERRLTDPRLPITYRSKVATTQFIPWPIEIRFCEYELSTNQTKSPPSLRYWFRAKGKLSDDQALHRCVVAYASDLIFLQVSLNPHREKGFKTRSVSLDHSLWFHRSLRADEWVLFAIFTPSAYNARVFVTGQMFNQKGELLVSLVQEGLARKINPGNSAIKSKL* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1337 436 PANTHER ACYL-COA THIOESTERASE 58 436 IPR003703 GO:0006637|GO:0047617
Apr10g1337 436 SMART cnmp_10 22 139 IPR000595 -
Apr10g1337 436 SUPERFAMILY cAMP-binding domain-like 26 119 IPR018490 -
Apr10g1337 436 TIGRFAM tesB: acyl-CoA thioesterase II 145 423 IPR003703 GO:0006637|GO:0047617
Apr10g1337 436 Gene3D - 135 425 IPR042171 -
Apr10g1337 436 Pfam Thioesterase-like superfamily 168 421 - -
Apr10g1337 436 CDD Thioesterase_II_repeat2 153 245 - -
Apr10g1337 436 CDD CAP_ED 24 119 IPR000595 -
Apr10g1337 436 PANTHER ACYL-COA THIOESTERASE 58 436 - -
Apr10g1337 436 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 255 424 IPR029069 -
Apr10g1337 436 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 137 249 IPR029069 -
Apr10g1337 436 Gene3D Jelly Rolls 4 132 IPR014710 -
Apr10g1337 436 ProSiteProfiles cAMP/cGMP binding motif profile. 24 92 IPR000595 -
Apr10g1337 436 Pfam Cyclic nucleotide-binding domain 41 118 IPR000595 -
Apr10g1337 436 CDD Thioesterase_II_repeat1 320 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1337 Apr-Chr10 25704837 25713520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1337 24 436 Acyl Lipid Metabolism Gene Families AT1G01710 65.133 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1337 K01068 - gmx:100803260 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1337 10 25704837 25713520 Apr10g1337 10 25704837 25713520 ECH
Apr4g2229 4 31291683 31297627 Apr10g1337 10 25704837 25713520 PCT