Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2222 ATGGAAGAGCTTCGTATTTATAGGCAACAAATGTCCACACACACAAAGGCACAACTCACACTAAACAGTTTTGAAAAGGGTGGAGATGGAGGTGGCCCTTCAGAATGTGACAACCAATACCATTCTGATGACACTCCAGTGGTTGCACTTTCCACTGGATGGTTCAATCACAAGAGTAGGTGTCTCAATAATATTACCATCAGTGCCAATGGAAGAAGTGTGGTGGCTATGGTTGTTGATGAGTGTGACTCCACCATGGGATGTGATGAAGACCATGATTATCAGCCTCCATGTCCTAACAACGTTGTTGATGCCTCCAAGGCTGTCTGGAAAGCCTTGGGAGTTCCTCATGATCAATGGGGTGGCCTTGACATTACTTGGTCAGATGCTTCATAA 396 0.452 MEELRIYRQQMSTHTKAQLTLNSFEKGGDGGGPSECDNQYHSDDTPVVALSTGWFNHKSRCLNNITISANGRSVVAMVVDECDSTMGCDEDHDYQPPCPNNVVDASKAVWKALGVPHDQWGGLDITWSDAS* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2222 131 PANTHER LIPID TRANSFER PROTEIN 10 130 - -
Apr4g2222 131 Gene3D - 15 129 IPR036908 -
Apr4g2222 131 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 10 130 IPR039271 -
Apr4g2222 131 SUPERFAMILY Barwin-like endoglucanases 13 129 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2222 Apr-Chr4 31230184 31230698 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2222 - - gmx:100792850 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2222 4 31230184 31230698 Apr4g2222 4 31230184 31230698 ECH
Apr4g2222 4 31230184 31230698 Apr10g1346 10 25783546 25784118 PCT