Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1346 ATGAGGATCAAAGTTAGTTCAAATTCTTTTCAAACCATCCTCTTTCTTTTAATTCTTGTGGCAACCCTTTGGATAACCATTGAAGCTGCTACTTGCCGACCTAGTGGAAGGATAAGGGGTAAAAAACCTCCTTCAGGAAAATGCAATAAAGAGAATGAATCTGAATGCTGCAAACAAGGAGAGTTTTACACCACATTCAAGTGTTCTCCACCCGTGTCTCGCCGAACAAAGGCTATCCCAACACTTAACAATTTTGAGAAAGGTGGAGATGGAGGTGGCCCTTCAGAATGTGACAACAAATTTCACTCAGATAAGACTCCTGTTGTAGCATTATCAACTGGATGGTTCAATAATAGAAAGAAGTGTCATCACAATATCACTATCTTTGCAAATGGAAAAAGGGTCAATGCCATGGTTGTTGATGAGTGTGATTCTACAATAGGGTGTGATGCTGAGCATGATTTCCAGCCTCCATGCCCTAACAATGTTGTTGATGCCTCTAAAGCTGTTTGGAAGGCCTTGGATGTGCCAGAAGATAAGGGTGAATTTGACATCCACTGGTCTGATGCATGA 573 0.4136 MRIKVSSNSFQTILFLLILVATLWITIEAATCRPSGRIRGKKPPSGKCNKENESECCKQGEFYTTFKCSPPVSRRTKAIPTLNNFEKGGDGGGPSECDNKFHSDKTPVVALSTGWFNNRKKCHHNITIFANGKRVNAMVVDECDSTIGCDAEHDFQPPCPNNVVDASKAVWKALDVPEDKGEFDIHWSDA* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1346 190 SUPERFAMILY Barwin-like endoglucanases 79 188 IPR036908 -
Apr10g1346 190 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 9 190 IPR039271 -
Apr10g1346 190 Gene3D - 83 189 IPR036908 -
Apr10g1346 190 PANTHER RIPENING RELATED PROTEIN FAMILY 9 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1346 Apr-Chr10 25783546 25784118 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1346 - - gmx:100795478 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1346 10 25783546 25784118 Apr10g1346 10 25783546 25784118 ECH
Apr4g2222 4 31230184 31230698 Apr10g1346 10 25783546 25784118 PCT