Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2133 ATGTGCACTGGTGCTGAATCTCGAAGAATAGTAGATGGTGACATTGTGATTTCAAAGGGTGGAGGAGAATACAATGAGGGGGGAATGAGAACAAGAGAAGGTAGTGGTGAAGGAGCAAGAAATGTTCAAGGCCTTCTTCAACGTTTACATCACCTCCTCAGAGCCCTTCTCCCTACCCTTTCTCTCTCTGAGGTGAAAGAAGAGTTTAAATCACTGGTGAAAATTTCGTGTCCAATAATGATGACTAATACACTTATATACTCTCGATCTGTCGTTTCTATGCTCTTCTTGGGTCGCCAAGGGAAAGTAGAGCTAGCTGGAGGTGCACTTGCAATTGGGTTTGCGAACATCACTGCCAATTCATTCCTAAAGGGTCTTACTATGGGAATGGATCCAATTTGTTGCCAGGCATATGGAGCAAAGAGATGGTCAGTTCTTAGCCAAACCTTTTGCAAAACCTTGTGTCTACTCCTTCTTGTTGCCATACCCATTTCACTATTATGGCTAAACATGGGACCCCTTCTTCAATGGCTAGGCCAAGACCCTGAAGTCACAAAAGTTGCCCAAGTTTACATGGTTTTCTCTATCCCAGAATTGCTTGCTCAAGTTCATCTAAACCCACTAAGGTCCTTCCTAAGAACCCAAGGCTTAACTGCCCCACTAACTATAGCTGCCTCTTTTGCAGCCATTTTACACCTTCCCATCAATTATTTCTTGGCAACATATTTAAAGTTAGGGGTAAAAGGCATTGCATTAGCCACAGGTTTTAATTCCATAAACATGATTTTAGGGTTGGTTCTTTATCTTCTTGTGTCAAAGAAACCTCTAAAACCATGGGAAGGAGCTACAATTCTCTCTATTCTCCATGATTGGAGACCATTACTAAGCCTAGCATTGCCTAGTTGCATTTCAGTGTGCTTAGAGTGGTGGTGTTACGAAATAATGCTTTTTCTATGTGGTCTGTTAAGCAATCCACAGGCCACGGTTGCTACCATGGGTGTGCTTATTCAAACAACTGGGTTCTTATATGTGTTCCCATTTTCAATAAGTGCTGCATTGACAACAAGAATTGGTCATTCATTAGGTGCGGGACAACCTTCTCGTGCCCAAAGTACTGCCACTGTAGGCCTTTTCTTCGCATTTGGCTTAGGGGTCTCAGCCTTCATTTTCTTGATGTTTATGAGGAAAATGTGGGGGAAACTTTTCACAAGTGAGGTACAAATTGTTGATATGGTCACTACCATACTTCCAATTTTGGGGTTGTGTGAGATTGGTAATTGGCCTCAAACTGCTGCATGTGGGATTTTAACAGGAACTGCACGCCCTTATGTGGGTGCAAGAATAAATTTGTGTGCATTTTACTTAATTGGATTACCAGTTGCAATTTTTGCTGCTTTCATACGTAGATGTCAATTGAGGGGTTTGTGGCTTGGAATGTTAGCAGCACAAATATCTTGTTTTTGTATGATGTTGTACACAGTGATACAAACAGATTGGGGGCACCAAAGTAAGAGAGCTGAACAACTAGCTCAAAGAACAATAGAGGAAGAAAATGTAAATGATGAGGAAAGTGGGCTCCTTAATTCTGATTTATGA 1596 0.4167 MCTGAESRRIVDGDIVISKGGGEYNEGGMRTREGSGEGARNVQGLLQRLHHLLRALLPTLSLSEVKEEFKSLVKISCPIMMTNTLIYSRSVVSMLFLGRQGKVELAGGALAIGFANITANSFLKGLTMGMDPICCQAYGAKRWSVLSQTFCKTLCLLLLVAIPISLLWLNMGPLLQWLGQDPEVTKVAQVYMVFSIPELLAQVHLNPLRSFLRTQGLTAPLTIAASFAAILHLPINYFLATYLKLGVKGIALATGFNSINMILGLVLYLLVSKKPLKPWEGATILSILHDWRPLLSLALPSCISVCLEWWCYEIMLFLCGLLSNPQATVATMGVLIQTTGFLYVFPFSISAALTTRIGHSLGAGQPSRAQSTATVGLFFAFGLGVSAFIFLMFMRKMWGKLFTSEVQIVDMVTTILPILGLCEIGNWPQTAACGILTGTARPYVGARINLCAFYLIGLPVAIFAAFIRRCQLRGLWLGMLAAQISCFCMMLYTVIQTDWGHQSKRAEQLAQRTIEEENVNDEESGLLNSDL* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2133 531 PANTHER PROTEIN DETOXIFICATION 53 52 516 - -
Apr4g2133 531 Pfam MatE 300 462 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr4g2133 531 Pfam MatE 78 238 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr4g2133 531 PANTHER MULTIDRUG RESISTANCE PROTEIN 52 516 - -
Apr4g2133 531 CDD MATE_eukaryotic 68 505 IPR045069 GO:0042910|GO:1990961
Apr4g2133 531 TIGRFAM matE: MATE efflux family protein 78 476 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2133 Apr-Chr4 30417413 30421696 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2133 K03327 - gmx:100816717 886.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2133 4 30417413 30421696 Apr4g2133 4 30417413 30421696 ECH
Apr4g2133 4 30417413 30421696 Apr10g0847 10 20798844 20804830 PCT