Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0847 ATGTGCAGTGGTGCTGAATCTCGAGGAAATATAAATGGTGAGGCTGTGATTTCAAAGGTAGGAAGAGACTATGAGAATAGAAACATGAGAACCATAGAAGGTGGCGAAAGAGCTTTCAACTGTGGCACATTCATTCAAGGCCTTCTTCAATGCGTAAATCATCATATCATTGCTCTTCTCCCTACCCTTTCTGCCTCTGAGTTGAAAGAAGAGTTGCAATCGCTTGCAAAGGTTTCATGTCCTATTATAATGACTAGCCTAATGTTGTATTCTCGATCTGTTGTGTCCATGTTGTTTTTGGGTCGACAAGGGAAAGTGGAGTTAGCTGGAGGCTCTCTTGCACTTGGGTTTGCCAACATAACAGCTAATTCAATCCTCAAGGGACTCACTATGGGAATGGATCCAATTTGTTGCCAAGCTTATGGAGCCAAGAGATGGTCAGTTCTTAGCCAAACCTTTTTCAAAACTTTATGTCTCCTCCTTGTTGTTGCCATAGCTATTTCAATTTTATGGCTAAACATGGAACCGATACTTCAAATGCTAGGTCAAGACCCTGAAGTCACAAAAATTGCCCAAGTTTACATGGTTTTCTCTATTCCAGAGTTGCTAGCTCAAGCTCATCTTAATCCATTGAGGTCTTTCTTAAGAACCCAAGGCTTAACCACCCCAGTGACTATAGCTGCATCTTGTGCAGCATTATTACACCTACCCATTAATTATTTCTTGGTCATATACTTAAATTTAGGAGTAAAAGGCATTGCATTGGCCACTGGTTTGAATTCAATAAACATGACTTTAGGCTTGTTGGTATATCTTCTTTACTCAAAGAAACCCTTGAAACCTTGGCAAGGAGCAACAATTCTCTCATCATTCCAAGGGTGGAAACCGTTGCTAAGTTTGGCATTGCCTAGTTGCATTTCTGTGTGCTTGGAGTGGTGGTGGTATGAGATAATGCTTTTTCTATGTGGGTTGTTAAGCAACCCACAAGCCACAATTGCTACTATGGGAATACTTATTCAAACACTTGGCTTCTTATATGTGTTCCCATTTTCTTTGAGTATAGCTTTGACAACAAGAATTGGACACTCATTAGGTGCAGGGCAAGCCTCTAAGGCCCAAAGTACAGCCATAATTGGGTTTGTGATAGCATTTACTTTGGGAATCTTTGCCTTCATTTTGTTGATATCTGTTAGACAATCATTGGGAAAACTTTTCACTGATGAGAAACAAATTGTTGATATGGTCACCACTATACTTCCAGTTCTTGGGTTATGTGAGATTGGTAATTGGTCTCAAACAGTTTCATGTGGGATATTGGCAGGGACTGCGAGGCCTAAAGTGGGTGCTAGAATAAACTTATGTGCATTTTATCTAATTGGGTTGCCAGTTGCTATTTTTGCTACCTTCATATACAAATATGAATTTGTGGGTTTGTGGTATGGAATGTTGGCAGCACAGGTTTCTTGTGTTTGTATGATGGTATACACATTGATTCAAACAGATTGGGGGCAACAAACTAAGAGAGCAGTGGAATTAGCTCAGAAAACAACAGAGCAAGAAAATGTAAATGATGAGGAAAGTGGGTTGATTAGTTCTGATCAATGA 1605 0.3994 MCSGAESRGNINGEAVISKVGRDYENRNMRTIEGGERAFNCGTFIQGLLQCVNHHIIALLPTLSASELKEELQSLAKVSCPIIMTSLMLYSRSVVSMLFLGRQGKVELAGGSLALGFANITANSILKGLTMGMDPICCQAYGAKRWSVLSQTFFKTLCLLLVVAIAISILWLNMEPILQMLGQDPEVTKIAQVYMVFSIPELLAQAHLNPLRSFLRTQGLTTPVTIAASCAALLHLPINYFLVIYLNLGVKGIALATGLNSINMTLGLLVYLLYSKKPLKPWQGATILSSFQGWKPLLSLALPSCISVCLEWWWYEIMLFLCGLLSNPQATIATMGILIQTLGFLYVFPFSLSIALTTRIGHSLGAGQASKAQSTAIIGFVIAFTLGIFAFILLISVRQSLGKLFTDEKQIVDMVTTILPVLGLCEIGNWSQTVSCGILAGTARPKVGARINLCAFYLIGLPVAIFATFIYKYEFVGLWYGMLAAQVSCVCMMVYTLIQTDWGQQTKRAVELAQKTTEQENVNDEESGLISSDQ* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0847 534 PANTHER PROTEIN DETOXIFICATION 53 55 519 - -
Apr10g0847 534 CDD MATE_eukaryotic 71 508 IPR045069 GO:0042910|GO:1990961
Apr10g0847 534 PANTHER MULTIDRUG RESISTANCE PROTEIN 55 519 - -
Apr10g0847 534 Pfam MatE 303 465 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr10g0847 534 Pfam MatE 81 241 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr10g0847 534 TIGRFAM matE: MATE efflux family protein 81 479 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0847 Apr-Chr10 20798844 20804830 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0847 K03327 - gmx:106798137 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0847 10 20798844 20804830 Apr10g0847 10 20798844 20804830 ECH
Apr4g2133 4 30417413 30421696 Apr10g0847 10 20798844 20804830 PCT