Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2111 ATGGAATATCCGAATCAGCATCCTTATCCACCACAACCCTCTCCCTCTGCACCGATGCTGCCTGTCCCTGTCGCCGTGATCGGTCCTCAGTATTGTGCTCCGTACCCCATAGATCTGGCTATTGTCAAGAAGGTCATGACCATTGCGGATGGTAGCTTCGTTGTCACCGACATCAATGACAACGTTGTCTTCAAAGTTAAGGGTTCTGTCTTATCTCTCCGTGATCAACGAGTCTTGATTGATGCCGCCGGCAATCCCATCGCAACCCTACGCCGGAAGATAATGACGGCACACGATCGATGGCAAGCCTTTAGGGGCGAAAGCACAGATCCAAAAGATCTAATTTTTACTCTGAAGCGCTCATCCCTGATCCAGTTTAAGACTAAATTAGATGTGTTTTTAGCCCATAACACCACCGAAAATGTTTGTGACTTTAAGGTCAAAGGTAGTTGGATGGAACGATCTTGCATTGTTTATGCTGGTGAATCTAACGCCATTGTTGCCCAGATGCATAAAAAACATACAGTTCAGAGTATTGTAATGGGGAAAGATCACTTCATGGTCACTGTGTATCCCAACATTGATTATGCGTTTATAGTAGCGCTAATCGTGATTCTTGATGAGCTTAATGATGATGCAAAGGATGATTAG 651 0.4485 MEYPNQHPYPPQPSPSAPMLPVPVAVIGPQYCAPYPIDLAIVKKVMTIADGSFVVTDINDNVVFKVKGSVLSLRDQRVLIDAAGNPIATLRRKIMTAHDRWQAFRGESTDPKDLIFTLKRSSLIQFKTKLDVFLAHNTTENVCDFKVKGSWMERSCIVYAGESNAIVAQMHKKHTVQSIVMGKDHFMVTVYPNIDYAFIVALIVILDELNDDAKDD* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2111 216 Gene3D - 24 215 IPR038595 -
Apr4g2111 216 PANTHER - 22 214 IPR007612 -
Apr4g2111 216 SUPERFAMILY Tubby C-terminal domain-like 24 209 IPR025659 -
Apr4g2111 216 Pfam LURP-one-related 26 205 IPR007612 -
Apr4g2111 216 PANTHER TUBBY C 2 PROTEIN 22 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2111 Apr-Chr4 30039435 30040708 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2111 - - ccaj:109788428 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2111 4 30039435 30040708 Apr4g2111 4 30039435 30040708 ECH
Apr4g2111 4 30039435 30040708 Apr10g0819 10 20333405 20334461 PCT