Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0819 ATGCAGAACTCCGCGAACCCTTCCGGTATCATCAACGCTCAGTATTGTGTTCCCTATAACGTAGAACTAGCAATTGTTAGAAAGGTCATGACACTTGCTGATAAGCTCACCGTCACCGACGTCAATGGCAAAATCGTTTTCAACCTTAAGGCCTCTCTCATGACCTTCCATGATCACCGTGTCTTACTTGATTCTGCCGGAAATCCCGTCCTCACGCTTCGTCGAAAGGTAATGTCAGCACATGATAGGTGGCAAGTTTTTCAAGGTGAAAGCATGGAGCTGAAAGATTTGGTCTTTAGTGTAAAGCGATCATCCATGTTCCAGCTAAAGACAAAATTAGATGTGTTCTTAGCTAATAATACTAACGAAGAAGTTTGTGACTTCAAGGTGAAAGGAAGTTGGTTCGAGCGATCTTGTGTTGTTTATGCTGGTGAATCTCTTAGCATTGTTGCCCAGATGCACAAGAAGAACACTGTTCAAAGCATTGCGTTTGGGAAAGATAATTTCATGGTTACTGTGTTTCCCAACATCGATTATGCATTCATAGTGGCTCTAATTCTGATTCTTGACGAAATTAACCAAGTCAAGAATCAAGCTTAG 600 0.4183 MQNSANPSGIINAQYCVPYNVELAIVRKVMTLADKLTVTDVNGKIVFNLKASLMTFHDHRVLLDSAGNPVLTLRRKVMSAHDRWQVFQGESMELKDLVFSVKRSSMFQLKTKLDVFLANNTNEEVCDFKVKGSWFERSCVVYAGESLSIVAQMHKKNTVQSIAFGKDNFMVTVFPNIDYAFIVALILILDEINQVKNQA* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0819 199 PANTHER TUBBY C 2 PROTEIN 3 197 - -
Apr10g0819 199 Pfam LURP-one-related 12 188 IPR007612 -
Apr10g0819 199 PANTHER - 3 197 IPR007612 -
Apr10g0819 199 SUPERFAMILY Tubby C-terminal domain-like 10 193 IPR025659 -
Apr10g0819 199 Gene3D - 8 197 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0819 Apr-Chr10 20333405 20334461 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0819 - - gmx:100527088 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0819 10 20333405 20334461 Apr10g0819 10 20333405 20334461 ECH
Apr4g2111 4 30039435 30040708 Apr10g0819 10 20333405 20334461 PCT