LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr4g2103	ATGCCAATCTGTATGTACCAAATTCGGAACGCGCACGCCTTAGCGGATCCTGAGCTGCACCGTGCCGCCGATAAAGATGACTCTGAAGCTCTCCTTGAAGCAGTTGCAATGGCTGGGCTCGTTGGTTTTCTTCGCCAGCTTGGCGACCTTGCTCAGTTTGCCGCTGAGATGTTCCATGATTTACATGAAGAAGTAATGTCTACAGCTGCAAGAAGCCACAGTCTTATCTCTCGTGTTCAGCAGCTCGAGGCTGAAGTTCCAGCACTTGAGAAAGTTTTTTTGTCGCAAACTCATCATTCATCATATTTTACAAATGGAGGGATTGAATGGCATCCTAATCTTCAGTCTGAACAGAATCTTGTTACTCGCGGAGACTTACCTCGATTTATAATGGATTCATATGAAGAATGCCGTGGTCCCCCAAGACTATTCCTTCTGGACAAGTTTGATGTGGCTGGGGATGGAGCATGTTTGAAGCGTTATACTGATCCATCATTCTTTAAGGTGGAGTCTACTTCTTCTAGAACAACAACAGTAGAAGTTCACAGGGAAAAGAGAAATCGTAAAGTCAAGCCAAAGAAAGGAGCACAGCTGAGGAATGGTGAAACCCCACAAGTTGTGCCATCACATTCAAAACTTCATCAGTTGTTGCTTGAGGAGCGTATTGAGAATGCTTGTAGTGATCCTGCTCGTCTTCTGAAGTTGAAAAAGAAACAATTGAATGGATCTGCAGTTGAAGGAAAAACTGGGAGAAGTTACATGGCGAAAATTCTGGAAAATCCCTCACCTGATCTTAAAATGGCTTCTGAAACTTCAATTCCTCTGCCTGTGAAATTGACGTCAGATGATACTAGTGAAAGTGGGATTAAAATACTTGAAATCAGTAGCATTACTCCTTTGAAAAGGTCTTTGGAAGATGAAAACATTTGTTCATCACCAAATGAGCAGGAGATAGAACTGAATCCAAACTCAGGAAGGGATAGAGAGACAAATGGATATATTGTGAAGGTGCATGAACAAATCTCTGCTGGTGTGACAAATGAAATGTCTTCTAATCATCTCAAGGTGCCTGATGAAAGAGAGTTGGTTTTTGATGAACAAAAGAAAAGAGAATATAACTTAGATGGCTACCATTCTGATGATGTGACTAGTGATGTTGATGATTATATGGATGCGTTAGCTACCATGGATTCAGAATTAGAAACAGACAATGAGCGTAGACCTAAGAAAAGCTTTTTGAGTTTTCGAAAGATAACTCATTCAAATGGCAAAGGAGATCACCAACTGCAAGCTCAATTTTCAGATTCTCAATCATTTGGAGACTCCTCAACATCTGAAGAAATTAGTTCATTGGAACAAGATAGAAATGGAGATCTTAATGAAGTGCAAGCTCAATCTTCAGATTCTCAATCATCTGGAACCTCTTGTGCATCAGATGATCATAGTTCATTCAGAAGAGATAGAAGTGCAGGCCATACCCAACTGCAAGCTCAGTTTTCAGATTCTCAGTCTATTGGAAACTCCACATCGGAGATAGAAGACGTGCCATTCAACCAGCTTTCCCAAACTGCTGAGTTACAAAAGACTTATTGTGGTGAGTTTATCACATGTGATGATGCACATGTTTTGGGAGAAGTGATTTCTGATTCTAGACCAGTCTCTTCTGGTTTGTGTCTGATGGATTCAGGAGATTTATTGCTGTCTTCAGATCTTGGACCCACCTCACTGGTGTCCCAGCCTTCAGGTACTCAATCAGATGAAACATCATCTAGTGAATATGGTAATCGTTCTGAGATCAAAGTGTTGCAGGCAGAATCTCATAATGAATACTGTTCTGGAATTTTGGTTAGTGGAGATATTGGTTCAAATGGGGTGGATCCTATTTGCCCATCTTGGGAAGTAGACATGAATTCAGGTACTAAGCGACTGCTTGGTGGCCACAATTTAAAATCTAGTGATGACATCTTAGCCACCCAATTTAACTCAGAAGATTTGTTTCCTGTTACAGAAACTACAATGAAGAGAAGCCTTATGAAGGAGCCATGCTCTGATTTTACCCACAGAAATCTACAGAATGAACCTGAGTTAGCAGAAGTTAAAGTTCTGTATCCTGATCAGCAGTCAAATTTTGAGGAGGTACCAAGGATATTGCCTGGTGATGAAATTAGTGAATCCCCGCGCAGTTTGGATCTAGTTGAAGATGATGGTCATATTAAACATCCATCTTCAGATATCACATCTTCAATGACTAGTTTCACAAAGTTGGAAGAATCTCTTTCTATTTTTGCAGATCTTCACAAGAAAGAGATAATAGTCAATAAGGCAGTTAATAGAGAATCTTTGACAGAATTAGCAGCAGAAAAGGCAGTAGATCAACCAGAAATTGTTTCTGCTGATGCACAGTCGAACCTGAACAGATCAGTTCCCTGTGATCCTTCTGATTCTGGAATACATAATAATATTCAAAATTCTCTTACGGAGAAAATCCAATATGGTTCTTCTATCAATGACGTGAAAATGGTGGCCATATGTTCAGAGCTAGACTCTCAGAGGTCAGAATCTGTATTTGTTTGCCAGAACAATCTGCTAAACATCAAAGATAGTTTGTCACCACCTTCCTATAATCAATTAGAGCCTGAAACCGATTTACAGCTGCTCTTAAAACCAGAAGTCAGTCAACAGGATGCAGGATTCAGAAATCAGGAAAATTATACCTTTGAGGAATTTCAACCTCAACAGAAGCAGATATCAAATCAGTGGGACCAAGAAAGAACCTACCAGCCTATGTCTGAGTTTGCCGCTGAAACCATTCCAGATAAACATTCATGTGATTCCTCAACAAAGTCATCTGGGCAGGATATTAACCCAACAAAATGTGTCATGGATCCATTTAAGCCTCTTCTTCCTGACCTCCTACACAAGGCAACTAAAGTCAATCTTGAGGAGATGCCACCAATGCCTCCTCTACCACCAATGCAGTGGAGAACGAGCAAAGGTCAACTTGCTTCCCTATTTACACACAGAGAAGATGTAGTAAGACAAGCCTCATTCCAACCAATGCAGCCAACTGAACCTGATGTTAAGTCTCAATTTGGTTTATCAACTTTTGAAAAATCGACCTTGTTGTCTCAGTATCCATTTTTGCCTGTCATGGCTGAGAAAAGTAATATGCACCAAAATTCTTATGGCTTTTCAGCAGGTGTTTCAGAGCAGCCTGTTGCTATTTCTATGCAATTTCCAGAAATGGTGAATGAACCAAATGGTCAAGACAAGTGCCTAGTTCTGGACAGAAGCCAAATCCAGAACCCTATCTTAACATCACAAGACGGGCCTCCACTTGGATATGCTGTTGCTTTGGAAGGCATACTGAATTCAAGTTCATGGCAATCAATAATACCACCTTCTGAATGTGCTGTTTCTGGGATTGATCCCATTTTTCAGCATGAAAAACCAACTCAATCTCCAAGTCAATTAGTGGAAAATCCTGGTTTAGAAAGTAAAATAGAGGGACCTGGAGAATTGCATTTGGTGCTACCTGCTGAATGTCCTGTTTCTGGAGACGATCCCATTTCTCCAAAAGAAAAACCAATTCTATCTCCTAGTCAATTAATGGAAGAGGCTAGTTTAGAAGTTACGACACTTAAGCAGTCTTCAATTAATCTGGAAAGGGAAAGAGGAGATCCTGCAGCCTCAACTGTATCACCTCCAAGTATACAAATTGTGCAGCCCAATCACAGCCTTCATTTTTCAGAGGGAGAAATGGTATTTTCATTGGACGCATCTGCTCAAACATCAGATTTTGATTCTGAAATGCCAAATGGAAGACCAAAGAATAAGGTTCCTCTTCCCCAGAATCCTGTAATTGATCCTGTTGCTGCTTTTGACAAAAGCAGGCTGAGGAAGGTCACTGAACGTGTTATGCCTCAGAGAGCACCAAAGGGAGATGAAAGAGACTCATTGTTAGAGCAGATAAGAACGAAGTCCTTCAATTTGAGGCCTGCCATGGTTAAACAACCACCCCGCATTCAGGGTCCAAAAACGAACTTGAAGGTTGCGGCCATCCTGGAAAAAGCAAATTCAATTCGCCAGGCATTGGCTGGAAGTGATGAAGATGATGATGGAGATAGTTGGAGTGACTCTTGA	4143	0.4096	MPICMYQIRNAHALADPELHRAADKDDSEALLEAVAMAGLVGFLRQLGDLAQFAAEMFHDLHEEVMSTAARSHSLISRVQQLEAEVPALEKVFLSQTHHSSYFTNGGIEWHPNLQSEQNLVTRGDLPRFIMDSYEECRGPPRLFLLDKFDVAGDGACLKRYTDPSFFKVESTSSRTTTVEVHREKRNRKVKPKKGAQLRNGETPQVVPSHSKLHQLLLEERIENACSDPARLLKLKKKQLNGSAVEGKTGRSYMAKILENPSPDLKMASETSIPLPVKLTSDDTSESGIKILEISSITPLKRSLEDENICSSPNEQEIELNPNSGRDRETNGYIVKVHEQISAGVTNEMSSNHLKVPDERELVFDEQKKREYNLDGYHSDDVTSDVDDYMDALATMDSELETDNERRPKKSFLSFRKITHSNGKGDHQLQAQFSDSQSFGDSSTSEEISSLEQDRNGDLNEVQAQSSDSQSSGTSCASDDHSSFRRDRSAGHTQLQAQFSDSQSIGNSTSEIEDVPFNQLSQTAELQKTYCGEFITCDDAHVLGEVISDSRPVSSGLCLMDSGDLLLSSDLGPTSLVSQPSGTQSDETSSSEYGNRSEIKVLQAESHNEYCSGILVSGDIGSNGVDPICPSWEVDMNSGTKRLLGGHNLKSSDDILATQFNSEDLFPVTETTMKRSLMKEPCSDFTHRNLQNEPELAEVKVLYPDQQSNFEEVPRILPGDEISESPRSLDLVEDDGHIKHPSSDITSSMTSFTKLEESLSIFADLHKKEIIVNKAVNRESLTELAAEKAVDQPEIVSADAQSNLNRSVPCDPSDSGIHNNIQNSLTEKIQYGSSINDVKMVAICSELDSQRSESVFVCQNNLLNIKDSLSPPSYNQLEPETDLQLLLKPEVSQQDAGFRNQENYTFEEFQPQQKQISNQWDQERTYQPMSEFAAETIPDKHSCDSSTKSSGQDINPTKCVMDPFKPLLPDLLHKATKVNLEEMPPMPPLPPMQWRTSKGQLASLFTHREDVVRQASFQPMQPTEPDVKSQFGLSTFEKSTLLSQYPFLPVMAEKSNMHQNSYGFSAGVSEQPVAISMQFPEMVNEPNGQDKCLVLDRSQIQNPILTSQDGPPLGYAVALEGILNSSSWQSIIPPSECAVSGIDPIFQHEKPTQSPSQLVENPGLESKIEGPGELHLVLPAECPVSGDDPISPKEKPILSPSQLMEEASLEVTTLKQSSINLERERGDPAASTVSPPSIQIVQPNHSLHFSEGEMVFSLDASAQTSDFDSEMPNGRPKNKVPLPQNPVIDPVAAFDKSRLRKVTERVMPQRAPKGDERDSLLEQIRTKSFNLRPAMVKQPPRIQGPKTNLKVAAILEKANSIRQALAGSDEDDDGDSWSDS*	1381

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr4g2103	1380	MobiDBLite	consensus disorder prediction	489	509	-	-
	Apr4g2103	1380	MobiDBLite	consensus disorder prediction	938	957	-	-
	Apr4g2103	1380	Coils	Coil	1204	1224	-	-
	Apr4g2103	1380	MobiDBLite	consensus disorder prediction	434	509	-	-
	Apr4g2103	1380	MobiDBLite	consensus disorder prediction	571	596	-	-
	Apr4g2103	1380	MobiDBLite	consensus disorder prediction	187	208	-	-
	Apr4g2103	1380	PANTHER	WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED	591	1380	-	-
	Apr4g2103	1380	PANTHER	WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED	1	590	-	-
	Apr4g2103	1380	PANTHER	WASP-1	591	1380	IPR028288	GO:0005856\|GO:0030036
	Apr4g2103	1380	PANTHER	WASP-1	1	590	IPR028288	GO:0005856\|GO:0030036
	Apr4g2103	1380	MobiDBLite	consensus disorder prediction	434	479	-	-
	Apr4g2103	1380	MobiDBLite	consensus disorder prediction	1265	1287	-	-
	Apr4g2103	1380	Gene3D	-	1	90	-	-
	Apr4g2103	1380	ProSiteProfiles	WH2 domain profile.	1316	1334	IPR003124	GO:0003779
	Apr4g2103	1380	Gene3D	-	1292	1379	-	-
	Apr4g2103	1380	Gene3D	-	103	241	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr4g2103	Apr-Chr4	29912468	29919373	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr4g2103	-		-	aprc:113862670	2634.37

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr4g2103	4	29912468	29919373	Apr4g2103	4	29912468	29919373	ECH
	Apr4g2103	4	29912468	29919373	Apr10g0816	10	20213804	20222152	PCT