Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0816 ATGCCGCTCTCGAAGTACCGCGTGAGGAACGAGTATAGCTTGGCGGATCCCGAGCTGTACCATGCCGCCGACAAGGACGATCCCGAAGCTCTTCTCGAAGCCATCGCCATGGCTGGTCTTGTCGGACTCTTGCGCCAGCTCGGTGACCTTGCCGAGTTTGCTGCTGAGATCTTTCATGATTTACATGAAGAAGTAATGGCTACTGCTGCAAGAGGCCATGGTCTTATGGCTCGTGTTAAACAACTTGAGGTTGAAGTTCCTTCACTTGAGAAGGCTTTCTTTTCTCAAACTCATCATTCATCATTCTTTACTAATGGAGGGATTGACTGGCATCCAAATCTCCAGTCTGAACAAAATCTTGTTACTCGTGGAGACTTGCCTCGATTTATAATGGATTCATATGAAGAGTGCCGTGGTCCCCCTAGGCTGTTCCTTCTGGATAAGTTTGATGTAGCTGGGGCTGGGGCATGTCTGAAGCGTTATACTGATCCATCGTTCTTTAAAATGGAGTCAGCTTCATCTATAACTGGCATAGAAGTTCAAAGGGAAAAGAAAATTCGTAAAGTCAAGCTGAAGAAAGGAGCCCGGTTGAGGGATGGTGAAGCCCCTAACATTGTACCAACACATGCAAAATTACATCAGCTGCTTCTTGAAGAGCGTATTGAGAATGGTTATAGTAATCCTGCCCGTCTAGTGAAGTTGAAGAAAAGACAATTGAATGGACCTGCAGTTGAAGCAAAAGCTGGGAAAAGTTACATGGAGAAATTTTTTGAAACTCCCTCACCAGACCGTAAAATGATTTGTGAAACTTCAATCTTCCCACTGCCTGCGAAAGTGACATCGGATGATACTAGTGAGGCAGGAATTAAGATCCTTGAAATCAGTAGCATTAGTTCTGTGAAAAAGTCTTCAGGAAATAAAAACTCCTACTCTTCTCCTATGGAGCAGGAGTTAGAACTAAAACCATTTTCAGAAGTGGATGATGGGACAAATGTAGATCTTGTGACGGTGAAACAAGTCTCAGCTGATGTGACAGATAATATGTCTTCTAATCGTCTTCAGTTGCCTGATGAAACAGAATTGGTTACTGATGAGCAACAGAAAATAGAAGGCAGCTTAGATGGGTACCAGTCTGACGATGTGACTAGTGAGGTTGACAATTACATGGATGCTTTAACTACCATGGAGTCAGAATTGGAAACAGATAATGAGTATAAACCTAAGAAAAGCTTGAATATTAAAAAGGCAACCGATACTGATGATAAGGGAGGACATCTACTACAACCTCGTTTTTCAGATTCTCAATCATTTGGAGACTCCTCAATGTCTGACGACATTAGTTCATTCAAACAAGATAGAAATGAAGAACATATTGAAGTGCAAGCTCAGTTGTCAGATTCTCAATCAACTGGAACCTCCTCTACATTAGACAATATTAGTGCTTTCGGAAGAGATGGAACTGAGCATGTAGAAGTGCAAGCTCACTTCTCAGATTCTCAGTCTATTGGAAACTCCTCTATGTCAGATGAAAATGGTTCTTTCAAGAAAGATAGATCTGATTTCCATCACTCTGAATCATTAAGAACTGTTGTTGAAAATGTACAATCAGAACCTATATTATTCACAAATACCAAGTATTATGAACAGGAGGTTGAAGATACTCCATCCAACCAGCTTCCTCAAACTGTTGAGTCTCAAAACACTGATTGTGAGAGGTTTGTCATGCATGATGATCCACATGTTCATGAAGAAGAGATTTCTGATTCAGGGAAAGCCATTTGTGATCTGGTGACTTCAGAACAAGTGTTGTGTTCTGATCTTGGACCTGAACCTGCCTTACCAGTGATCCTACCTGCAGGAACTCAGTCGAATGAAACCCCATCTGACCCTGCTGAACTTAATTTAAGATTAGATGGTAATGCAGGTAGAGCAGGCCTTGTTGAATCTATTGCTTCCAAACCTGTTTCTCTTTCCCTAATAAAAGATGATGCTTGCCCGGTGGATTCTTCTGATAAAACATCATTAGACAATTTGGATGAGGATGATCCATATATTCACTCTGATGATTTGTTACAAGTTTCTAATGATTTGGAGTTAGCTCATGAAGGTGAATGCAGAGATCATTCTGAAATCAATATGTTCCAGGCAGAATCTCCTAATAATAACGCTTCTGGAATTTTGGTTAATAGAAATATTGGTTCACAAGGAGAGGATCCAATTTGCCCATCCATGGAAGAATTAGACTTCAATTCAAGTGCTATGCTGGGACTTGGTTGTCGAGACTCAAGAGATGAAGATTGTACTCCAGCAACCCGACTTAATTCGGAATCTCCTGTTGTGGAGATTCCTCCAGTGAGTTGCTTTTCTGGGGAACTATCTTCTGATTTAACTCATAACAATAGACAGGATGATCCTGGCTCACCAGAAATTGAAGTTTTGTATTCTGATCTGCAATCGAACATTGAAGAGATGCCAAAAATGTTGCATGGTGATGAAATAAATGGATCCACTTGCAGTGTTTATCCAGTTGAAGGTGATGGTCATTTTAATCATCCATCTGCTGATAATCATGTGATGGTAAATGATCTAGTCACTGAAAATGTTCAGTCAGAAGATCAAGCTGTAAATTCTGTTCCTTCTGTTGATAGTGCTGAAAATGAAGTGGGTATCGTTACTTGTCCAGCTTCAAGTCTGATTTATTCTTCATCAGGGATTCTTTCAGATTTGCAAGAACCTCTCTCAGGTTCTTATTCTTATCAGATGGAAATGGAATCGGATGAAGTAGAATTGACTCAAATTTCCATGGACTCGAATGCAGTGAAGATGGAGAATCAACTGGCACCATCGCCAGATGTAACATCATCTGATGTCACATATTCTCTGTTGAGTAATAATACGGAGTTAGATGAAACTCTTTCTACTATGACAGAACTACGTGAGAAAGAGATGGAAGTTGATGAAGCAGTTTCTAGAGAATCTTTGACAGAACTAGAGGAACAAAAGACAGTGGGTCAACCAGAAGTTGCTTCTGCTGATGTACAATTGAATCTAAACGAATCGGTGCCCTGTGATCTTCCAGATTCAAAAATATGTGATAATATTCAAAAGTCATTTCCAAGGGAGAAATTCCAACATAGTGCTTTTGTCGATGACACAAAAATGGTGCCTGAATTGTCAGGGTTAGACACCCAGCAGTTGGAATCAATATTTTATGCTCAGCAGCATGATCCCTTACAAAATGGAAGAGAGAGTTTTTCATCACCTTCTGGTAACCAATTGGAGTCTGAAACTGATTTACAGATGTTCTCACAATCCCAAATTGATAAACAGGATGCAGAATTTCCACTCAAAGATGAGAAAAACATTGCCTCAGAGAAATCTGAATCTCTGCAGATGCAGGTCTATCAGTTGGAGCAAGAAGGCACTCATGCTACTTCTGAATGTGTTTCAGAGATCCATGCAGATAAGCCATCATCATTTAATTTCTTGCCAGAGTCATCTAGCCCGGAGAACAACCCTGCAAAGCATTTCATGGAGCCTTTGAAGCCTCTTCTTCCTAATCTATTTCCCAAGGCAACTGAAAATAATCTTGATGAAATGCCACCTATGCCCCCTCTACCCCCTATGCAGTGGAGAATGAGCAAGGTTCAGCATACTTCCCTAGCTTCACAAAGAGAAGAGTTAGAAGTAAGTCAGGCCTCGGTCCAGCCAATGCAGCCAACTAAACCTGATCAGAAATCTCAATTTGGTTTTCCAACTTCAGAGAGAGACACCTTGTTGTATCAGAGTCCATTTTTGCCTGTCATGGCTGTGGAAAGTGATAAGCTCCAACATTCTTCTGGGTTTTCTGTAGGTGTTTCAGGGCATCCTGTTGCCATACCTTTTCAATTTCCATTCATGGTTAATGAATCAAATGGTCAATATAATTACCTACTGCTAGACAGAAGCCAAATTCAGAACCCCTTCTTAACATTACCTGGGGTATCTACCGGCATGCCTTCTCAAGGTTTTATTGTTGCTTCTGAGGAAGAAATGATACAGAATTCAAGCCAATGTGCGCCAAAACCAGCTGCTGCATATGCTGTTTCTGGACATGATTCCATCTCTCCACAAGAAAAGCCCACTCAACCTCCTCATCAGTTAATGACAGATTCTAGTTCAGATGATAAACCAGTTAAGCAGAGTACAAGTGATATGGTATCTATGGACAGGCCTCCACATAGTCATGCCGTTGCTTCCGAGGGAGAAATGGTACTGAATTCAAACACATGCCCTGCAATTCCACCTGCTGAATGTACTGTTTCTGGACATGATTCCATCTCACCTCAAGACAAACTGACTCAACCTACAAGCCAATTAATGACAGAGCCTGGTTCAGATGATAGAACACTTCTGGAATCAGTAACTAATGTCGTATCTATGGACAGGCCTCATGCTTACGCTGTTGCCTCTGAGGGAGAAATGGTGCAAAATTCTAACCTAGGCCCTCCTGTACCACCTGTTGAATGTGCTGTTCCTGAACATGAATCCATTTCTTCTCAAGAAAAACTGACTCAACTTCCAAGTCAATTAATGTCAGAGACTAGTTCTGAAGTTAAAGCAGCTCCACAGTCTATAAATAATGTGGAACGGGAACAAGGATGTCTGCCTGTCTCACTTATGTCACCATCAAACATGGAAAGTATGGAGCCTAATCAGAGTGTCCTGCCCTTTGAGGGGGAAATGGTGACGTACTTGGATACATCTGCTCAAACATCAGATATTGAGAGCGAAAGAACAAATGGGAAACCAAAGAATAAGCTTCCTCGTCCTCGTAATCCTCTAATTGATGCTGTTGCTGCTCATGACAAAAGCAAGCTTAGGAAGGTTACTGAACGGGTTATGCCTCAAATAGTACCGAAGGTAGATGAAAGAGATTCTTTGCTAGAACAGATAAGAACAAAGTCCTTCAACTTGAAGCCTGCTGGTTCTACACGACCTAGCATTCAAGGTCCAAGAACAAATTTGAAGCTTGCGGCCATCTTGGAGAAAGCAAACGCAATTCGCCAGGCTTTAGCTGGAAGTGATGAAGATGATGATGCGGATAGTTGGAGTGACTCTTGA 5103 0.4141 MPLSKYRVRNEYSLADPELYHAADKDDPEALLEAIAMAGLVGLLRQLGDLAEFAAEIFHDLHEEVMATAARGHGLMARVKQLEVEVPSLEKAFFSQTHHSSFFTNGGIDWHPNLQSEQNLVTRGDLPRFIMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFKMESASSITGIEVQREKKIRKVKLKKGARLRDGEAPNIVPTHAKLHQLLLEERIENGYSNPARLVKLKKRQLNGPAVEAKAGKSYMEKFFETPSPDRKMICETSIFPLPAKVTSDDTSEAGIKILEISSISSVKKSSGNKNSYSSPMEQELELKPFSEVDDGTNVDLVTVKQVSADVTDNMSSNRLQLPDETELVTDEQQKIEGSLDGYQSDDVTSEVDNYMDALTTMESELETDNEYKPKKSLNIKKATDTDDKGGHLLQPRFSDSQSFGDSSMSDDISSFKQDRNEEHIEVQAQLSDSQSTGTSSTLDNISAFGRDGTEHVEVQAHFSDSQSIGNSSMSDENGSFKKDRSDFHHSESLRTVVENVQSEPILFTNTKYYEQEVEDTPSNQLPQTVESQNTDCERFVMHDDPHVHEEEISDSGKAICDLVTSEQVLCSDLGPEPALPVILPAGTQSNETPSDPAELNLRLDGNAGRAGLVESIASKPVSLSLIKDDACPVDSSDKTSLDNLDEDDPYIHSDDLLQVSNDLELAHEGECRDHSEINMFQAESPNNNASGILVNRNIGSQGEDPICPSMEELDFNSSAMLGLGCRDSRDEDCTPATRLNSESPVVEIPPVSCFSGELSSDLTHNNRQDDPGSPEIEVLYSDLQSNIEEMPKMLHGDEINGSTCSVYPVEGDGHFNHPSADNHVMVNDLVTENVQSEDQAVNSVPSVDSAENEVGIVTCPASSLIYSSSGILSDLQEPLSGSYSYQMEMESDEVELTQISMDSNAVKMENQLAPSPDVTSSDVTYSLLSNNTELDETLSTMTELREKEMEVDEAVSRESLTELEEQKTVGQPEVASADVQLNLNESVPCDLPDSKICDNIQKSFPREKFQHSAFVDDTKMVPELSGLDTQQLESIFYAQQHDPLQNGRESFSSPSGNQLESETDLQMFSQSQIDKQDAEFPLKDEKNIASEKSESLQMQVYQLEQEGTHATSECVSEIHADKPSSFNFLPESSSPENNPAKHFMEPLKPLLPNLFPKATENNLDEMPPMPPLPPMQWRMSKVQHTSLASQREELEVSQASVQPMQPTKPDQKSQFGFPTSERDTLLYQSPFLPVMAVESDKLQHSSGFSVGVSGHPVAIPFQFPFMVNESNGQYNYLLLDRSQIQNPFLTLPGVSTGMPSQGFIVASEEEMIQNSSQCAPKPAAAYAVSGHDSISPQEKPTQPPHQLMTDSSSDDKPVKQSTSDMVSMDRPPHSHAVASEGEMVLNSNTCPAIPPAECTVSGHDSISPQDKLTQPTSQLMTEPGSDDRTLLESVTNVVSMDRPHAYAVASEGEMVQNSNLGPPVPPVECAVPEHESISSQEKLTQLPSQLMSETSSEVKAAPQSINNVEREQGCLPVSLMSPSNMESMEPNQSVLPFEGEMVTYLDTSAQTSDIESERTNGKPKNKLPRPRNPLIDAVAAHDKSKLRKVTERVMPQIVPKVDERDSLLEQIRTKSFNLKPAGSTRPSIQGPRTNLKLAAILEKANAIRQALAGSDEDDDADSWSDS* 1701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0816 1700 MobiDBLite consensus disorder prediction 1368 1402 - -
Apr10g0816 1700 Gene3D - 1608 1699 - -
Apr10g0816 1700 Gene3D - 104 212 - -
Apr10g0816 1700 MobiDBLite consensus disorder prediction 397 454 - -
Apr10g0816 1700 MobiDBLite consensus disorder prediction 429 445 - -
Apr10g0816 1700 MobiDBLite consensus disorder prediction 1214 1250 - -
Apr10g0816 1700 MobiDBLite consensus disorder prediction 1582 1607 - -
Apr10g0816 1700 MobiDBLite consensus disorder prediction 1357 1408 - -
Apr10g0816 1700 PANTHER WASP-1 1 517 IPR028288 GO:0005856|GO:0030036
Apr10g0816 1700 PANTHER WASP-1 1399 1700 IPR028288 GO:0005856|GO:0030036
Apr10g0816 1700 PANTHER WASP-1 488 1387 IPR028288 GO:0005856|GO:0030036
Apr10g0816 1700 MobiDBLite consensus disorder prediction 1436 1459 - -
Apr10g0816 1700 MobiDBLite consensus disorder prediction 1433 1459 - -
Apr10g0816 1700 MobiDBLite consensus disorder prediction 496 510 - -
Apr10g0816 1700 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1 517 - -
Apr10g0816 1700 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 488 1387 - -
Apr10g0816 1700 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1399 1700 - -
Apr10g0816 1700 Coils Coil 1120 1140 - -
Apr10g0816 1700 Gene3D - 1 90 - -
Apr10g0816 1700 ProSiteProfiles WH2 domain profile. 1637 1655 IPR003124 GO:0003779
Apr10g0816 1700 MobiDBLite consensus disorder prediction 399 427 - -
Apr10g0816 1700 MobiDBLite consensus disorder prediction 496 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0816 Apr-Chr10 20213804 20222152 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0816 - - gmx:100793542 2446.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0816 10 20213804 20222152 Apr10g0816 10 20213804 20222152 ECH
Apr4g2103 4 29912468 29919373 Apr10g0816 10 20213804 20222152 PCT