Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2102 ATGGAGAGTAGCAGTGGGAGAGAGAGCAACAGTGGGCGTGTGCCACTTTCTGGGGTGGTTGCAGATTGTGTGAAGCGGTGGTTCAAAGACACTCTGAAAGAGGCTAAGGCTGGTGACATCAACATGCAGGTGCTGGTGGGACAGATGTATTTTAGTGGCTATGGTGTTCCCAGAGATGCCCAAAAGGGAAGAATTTGGCTGACTAAAGCATCGAGGATTAGGTCTTCAGTTTGGAAAGTTGGTGACAAACGTCCAGGTTATAATGCCAGTGATTCTGATTCTGACGAGTTGAAGGAAGACTCTTAA 306 0.4771 MESSSGRESNSGRVPLSGVVADCVKRWFKDTLKEAKAGDINMQVLVGQMYFSGYGVPRDAQKGRIWLTKASRIRSSVWKVGDKRPGYNASDSDSDELKEDS* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2102 101 SUPERFAMILY HCP-like 32 73 - -
Apr4g2102 101 SMART sel1 40 75 IPR006597 -
Apr4g2102 101 PANTHER EXPRESSED PROTEIN 3 101 - -
Apr4g2102 101 MobiDBLite consensus disorder prediction 81 101 - -
Apr4g2102 101 Gene3D Tetratricopeptide repeat domain 18 87 IPR011990 GO:0005515
Apr4g2102 101 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 3 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2102 Apr-Chr4 29905159 29908522 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2102 - - gmx:100527576 162.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2102 4 29905159 29908522 Apr4g2102 4 29905159 29908522 ECH
Apr4g2102 4 29905159 29908522 Apr10g0815 10 20199074 20202936 PCT