Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0815 ATGGAGAGCAACGTTGGAGGAGAGAGGAGTGCGCGCTTGCCACTGTCAGAGGTGGTGGCAGATTGTGTTAAACGGTGGTTCAGAGACACACTGAAGGAGGCTAAGGCAGGGGACATAAACATGCAGGTTTTGGTGGGTCAGATGTACTTTAGTGGCTATGGGGTTCCCAGAGATGCTCAAAAGGGAAGAGTTTGGCTGACAAAAGCATCAAGGACTAGGTCATCGGTTTGGAAAGTAGGCGATAAGCACCCAGGTTATAATGCAAGCGACTCTGATTCTGATGAATTGAAGGAGGATTCTTAA 303 0.4851 MESNVGGERSARLPLSEVVADCVKRWFRDTLKEAKAGDINMQVLVGQMYFSGYGVPRDAQKGRVWLTKASRTRSSVWKVGDKHPGYNASDSDSDELKEDS* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0815 100 Gene3D Tetratricopeptide repeat domain 15 86 IPR011990 GO:0005515
Apr10g0815 100 SUPERFAMILY HCP-like 32 70 - -
Apr10g0815 100 PANTHER EXPRESSED PROTEIN 1 100 - -
Apr10g0815 100 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 100 - -
Apr10g0815 100 SMART sel1 39 74 IPR006597 -
Apr10g0815 100 MobiDBLite consensus disorder prediction 78 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0815 Apr-Chr10 20199074 20202936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0815 - - gmx:100527831 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0815 10 20199074 20202936 Apr10g0815 10 20199074 20202936 ECH
Apr4g2102 4 29905159 29908522 Apr10g0815 10 20199074 20202936 PCT