Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2005 ATGGCTTCTGAGAAGCATGCAAAGGAAGCAATAGTCACAAACATAGATGATGAAATTTGCAAGGAGGAAGAGAAATTGCAAAACAAGTCCATGTTCAGTGTGAAGAGCCTCCTCTGGCATGGTGGCTCTGTGTGGGATGCATGGTTTAGCTCTGCCTCAAATCAAGTGGCTCAAGTGCTGTTAACACTGCCATATTCTTTCTCTCAATTGGGCATGGTATCAGGGATCTTGTTTCAGGTGTTTTATGGGCTCATTGGAAGCTGGACAGCGTATCTAATCAGTGTCCTTTATGTGGAGTACCGCACCCGAAAGGAAAAGGAAAATGCTAGTTTCAAGAACCATGTCATTCAGTGGTTCGAGGTGCTTGATGGGTTATTGGGTCCATTTTGGAAGGCACTTGGGCTAGGCTTCAACTGTACAATGCTTTTTTTTGCAGCTGTGATACAGCTTATAGCATGTGGAAGTAACATCTACTACATAAACGATAAATTGGACAAAAGGACTTGGACCTATATTTTTGGAGCTTGCTGTGCCACCACTGTGTTCATACCCTCCTTTCACAATTATCGTATCTGTTCATTTTTGGGTCTTGGAATGACCACTTACACTGCATGGTACATGACTATTGCATCCATTATTCATGGCCAGGTAGAAAATGTGACGCACTCGGGTCCAACAAAGCTAGTCCTATACTTCACCGGAGCCACCAACATTTTATTTGCTTTTGGGGGGCATGCAGTAACTGTAGAGGTTATGCATGCGATGTGGGAGCCAAAAAAGTTCAAATACACATATTTGTTTGCAACTTTGTACGTTTTCACACTAACAATTCCTTCTGCAAGTGCCGTTTACTGGGCTTTTGGGGATGAACTACTAAACCATTCCAATGCTTTCTCTCTCCTTCCCAAAACTGGCTTCCGTGACCTCGCTGTATCCCTCATGCTCATTCACCAGTTCATCACATTTGGGTTTGCGTGTACTCCACTATACTTTGTGTGGGAGAAGTTAATTGGGATGCATAGCACAAGAAACATTTGTCTTAGAGCACTAGCAAGGATGCCAGTGGTGATACCCATTTGGTTTTTAGCAATACTCTTTCCCTTCTTTGGACCCATAAACTCTGCAGTTGGAGCTCTATTGGTTAGTTTCACTGTCTACATCATCCCCACCTTAGCCCATATGCTCACTTACAGAAAAGCCTCTACAAGACAGAATGCTGCTGAGAAGCTGCCATTCTTCATAGGAAGTTGGACTGCAATGTATATCTTGAATGGGTTTGTTGTGATATGGGTTTTGGTGGTGGGATTTGGGTTTGGAGGATATGCTAGCATAACCAACATCTTGAAACAAATTAACACATTTGGGCTATTTGCAAAGTGCTACCAATGTAAGCCCTCAACACCACCCACTCTAGCACCAACACCCCCTCGTGCTCATTGA 1440 0.4347 MASEKHAKEAIVTNIDDEICKEEEKLQNKSMFSVKSLLWHGGSVWDAWFSSASNQVAQVLLTLPYSFSQLGMVSGILFQVFYGLIGSWTAYLISVLYVEYRTRKEKENASFKNHVIQWFEVLDGLLGPFWKALGLGFNCTMLFFAAVIQLIACGSNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRICSFLGLGMTTYTAWYMTIASIIHGQVENVTHSGPTKLVLYFTGATNILFAFGGHAVTVEVMHAMWEPKKFKYTYLFATLYVFTLTIPSASAVYWAFGDELLNHSNAFSLLPKTGFRDLAVSLMLIHQFITFGFACTPLYFVWEKLIGMHSTRNICLRALARMPVVIPIWFLAILFPFFGPINSAVGALLVSFTVYIIPTLAHMLTYRKASTRQNAAEKLPFFIGSWTAMYILNGFVVIWVLVVGFGFGGYASITNILKQINTFGLFAKCYQCKPSTPPTLAPTPPRAH* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2005 479 Pfam Transmembrane amino acid transporter protein 40 433 IPR013057 -
Apr4g2005 479 PANTHER AUXIN INFLUX TRANSPORTER 2 467 - -
Apr4g2005 479 PANTHER OS05G0424000 PROTEIN-RELATED 2 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2005 Apr-Chr4 28728686 28733336 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2005 1 463 Organic Solute Cotransporters AT2G21050 74.298 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2005 K13946 - gmx:100778463 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2005 4 28728686 28733336 Apr10g0714 10 17945371 17952777 PCT