Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0714 ATGGTGTCTCAGAAGCAAGCAGAGGAAGCAATAGTGACTAACTTGAACGAGAACGAAACAGAACATGAAGGTGGCAACACCAGGGAAGAAGAGAGTGTGCAAGACCAGTCCATGTTCAGCCTCAAGAGCCTCCTATGGCATGGTGGTTCTGTTTGGGATGCATGGTTTAGCTGTGCTTCAAATCAAGTAGCTCAAGTACTCTTGACACTGCCGTACTCCTTCTCTCAACTTGGCATGCTATCAGGCATCTTGCTTCAAGTGTTCTATGGGCTTATGGGAAGCTGGACTGCTTATCTAATCAGTGTTCTATACGTGGAGTACCGCACCAGAAAGGAAAAGGAAAACGTCAGCTTCAAAAACCATGTCATTCAGTGGTTCGAAGTCCTTGATGGGTTACTTGGTCCATATTGGAAAGCAGCGGGGCTAGCCTTCAACTGTACTTTCCTCCTCTTTGGATCTGTAATACAGCTTATAGCATGTGCAAGTAACATCTATTACATAAATGACAAATTGGATAAACGAACTTGGACTTATATTTTTGGAGCTTGCTGTGCTACCACTGTGTTCATACCTTCCTTCCACAATTACCGTATGTGGTCATTTTTGGGTCTTGGAATGACCACTTACACGGCTTGGTACTTAGCTATAGCAGCTATCGTTCATGGCCAGGCAGAAAATGTGATACACTCGGGTCCATCAAAGCTAGTGCTATACTTCACTGGAGCCACTAACATACTCTACACGTTTGGAGGACATGCTGTGACCGTAGAGATTATGCACGCCATGTGGAAGCCCCAAAAGTTCAAGTACATTTACTTGCTGGCCACTTTGTACGTTTTCACACTAACGATTCCTTCCGCCGTCGCCGTTTATTGGGCTTTCGGAGATCAACTTCTTGACCATTCCAACGCCTTCTCTCTCCTCCCCAGGTCTGGCTTCCGTGACGCCGCCGTCATCCTCATGCTCATTCACCAGTTCATCACATTTGGGTTCGCGTGTACTCCATTGTACTTTGTGTGGGAGAAGGTAATTGGAATGCATGACACGAAGAGTATTTGTTTGAGGGCACTTGCAAGGTTGCCAGTGGTGATACCTATTTGGTTCTTGGCTATAATCTTCCCTTTCTTTGGGCCCATAAATTCAGCTGTTGGGGCTCTACTCGTTAGCTTCACTGTCTACATCATCCCTTCCTTAGCTCATATGCTAACTTACAGAAAGGCCTCTGCGAGACAGAATGCTGCAGAGAAGCCTCCTTTCTTCATGCCAAGCTGGACTGCAATGTATGTCTTAAATGCATTCATTGTGGGGTGGGTTTTGGTTGTTGGATTTGGGCTTGGCGGATGGGCCAGCGTGACCAACTTTGTAAAGCAAATTGACACATTTGGGCTTTTTGCCAAGTGCTACCAGTGCCCGCGACCGCCGCCACGGGTGGCGGCGGCACCAGCTCCTCATGTCCATCATTAG 1464 0.4706 MVSQKQAEEAIVTNLNENETEHEGGNTREEESVQDQSMFSLKSLLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQVFYGLMGSWTAYLISVLYVEYRTRKEKENVSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRMWSFLGLGMTTYTAWYLAIAAIVHGQAENVIHSGPSKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVFTLTIPSAVAVYWAFGDQLLDHSNAFSLLPRSGFRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKASARQNAAEKPPFFMPSWTAMYVLNAFIVGWVLVVGFGLGGWASVTNFVKQIDTFGLFAKCYQCPRPPPRVAAAPAPHVHH* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0714 487 PANTHER OS05G0424000 PROTEIN-RELATED 2 474 - -
Apr10g0714 487 MobiDBLite consensus disorder prediction 12 33 - -
Apr10g0714 487 Pfam Transmembrane amino acid transporter protein 47 440 IPR013057 -
Apr10g0714 487 PANTHER AUXIN INFLUX TRANSPORTER 2 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0714 Apr-Chr10 17945371 17952777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0714 4 470 Organic Solute Cotransporters AT2G21050 76.660 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0714 K13946 - gmx:100778463 889.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0714 10 17945371 17952777 Apr10g0714 10 17945371 17952777 ECH
Apr4g2005 4 28728686 28733336 Apr10g0714 10 17945371 17952777 PCT