Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1964 ATGCCATGCCATTCTGATATGACCAAGAATGAATTGCTGAAAACCTCTGATGACATGGGATTCGGCTTAAATCTCATAAATAAAAGTTCAAAACGGCAAAGCAGGTCAAAGACAGCTAAGGATAGTTCTGATTTGCCTCAACACAGTCCATATCCAAGGGATCTTGATAAGTTGAAATCAAAGTCTAATAATGTTGATCCACAAAACAGTGATCCTTGTCATAAAGCAAAGCACGATGTAGTAGGAAAGGTTCATCACAGGGAGAGTGCAAGGGAAAGTTCAAGTCAACCTGATGAACTTGTCAAGTATATGTCTAATTTGCCATCTTTTCTCAAGCGTTCTGATAGTGGAGAAAGCATTCAAGGGAAGGCTTTAAATGTTGGGGTTCTAGATTGGTCACAGCTTGAAAAGTGGAAGAGCAAGCAAACTCATATCAGGGCTGTAGCTAGTAGTTTCACACCATTCAATGGAAGTGAAGAATCATCATCATCATCATCAAGGGCAGCCACCACATCATCTACCACTGTTAGTGGCCATAATAAAAATTTTGATGGTAGAAAAGATTTGAGTTCTTCAAGAATCAAGGCATCTTATAAAGAAGGTCTTCCTAAAAGTTCCAAAGGGTCTTCTCAGAATGTCAAATATCAATATTCTGAAGCTAAAGCAAGAACAATTAGAGATGAACACAGAAACACACCCAGGGAATTTGAGCCCCGTGGCAAAACTCAGTCAGATACATCACTTCAAAGGGTGAAAAGGAATGACTACGATGAAATATCTTCAGTGGTTGGAAATTTTGTATCAAAGTCCAGGCATGATGTCGAAGCTAAGGGGAGAATGGAGGGTTTGCAACAGCATAGCCTCAAGAATAAGGAGAGAAATCTAGAGTCTAGTTCTGATAAGGGACTTCCATCATTAGAATCAAAAAGTAAAGGTGTCTCATTTGATTCTCAGAAGAAAATGAGTTCCAGAAGCATTGAAGCCAAGAAAAAGATGGATCAGTGGCAGGAGTCAGATATTGATGTTGGTCATAAACACAACCATAGGATGCCTAGTAACATTGTGCTGCTTCGTCCCCAAAGAGTTCTTCAATCGAGTTCTGAAGATTATTTTCAGCATTCTCAATCAAGAACTTCATCTGATGAAGACTTTTCAGAATCAAGCCGGAGTAGTTCATCATATGTTTCCCTTCAAGAGGAGGATTACACTAAAGATTTATATTCCAAAGTTCCACATTCAGGTGTACTTCCTTCTGTAACAGAGCTTGCTTCTTCCTCAGAAACAATGCAACATAGTTTCAATACTGACCTAGATATTGATCATTCCTCGGTTGTATCTAAGAAGCCAGCTTTCTTAAATAAGATGTCTAGTCTCCAAGCAGAAGATACTTCCATTGAAAAAGATGTGTTAGATGTCAATCAAAAAAATCAATGTGCTTTCAGTAATTTAAATAAATCACAGGATCATGAAACTGCTGAGATGATAGCTCAGAATTCCTCATCCCATCGTTGGCTTAGCTTAAGTTTAAGTCGCATTGGAAGAAGTTTCAGTTTCAAGGAAGGGTCTACCATTCCAAAACTTAGCTCCATGTATGTTAGTGCAAATTCTGGTCTAGTGACATCTGAATCTTCTGCTTTTTTGGATAATCTTAGCAAAGATAAGGTAAATGGTCATAAAAGAACCAGGTCCAGTCCCTATTTGAGGTTATTAGACCCCATATTGAAGCATAAGGCATCAAACATACACCATTCAGATGAACACTGTGTTACCCCAAAAGGAAGCATGCATTCAATCAGCTTGAGGACGGATAATCTGCCTGATGAAAAGAGAAGTGAATCACCAATTCAAGCCATTTTGCAGCTAACAATAAAAAATGGACTACCTTTGTTTAAATTTGTGCTCAACAATGAAAGAAAGGTTCTTGCTGCTACCATGAAGAGTTTAGCATCATCCGCGAAGAATGATGTAGACTGCTGTTTTACATTCTACCTTGTTAACGAAATCAAGAAAAAGAATGGTAAATGGATGAGTCAACGGAGTAAGGAAAAAAACTGTGGATATGTGTACAATATTGTTGGTCAGATGAAGGTTTCTAGCTCTAAAATGACTGAAACAAGAAAGCAGAAGAACCCCAAGAGAGAGAGTGTGGTGAAAGAATATGTCCTAATGGGGGTTGAAATTGACCAGCCAGATCAAGGATCACCGAAGTTCATCAAGAGCAAGGAACTTGCATCTGTTGTTATTGAGATCCCTTGTGAAAACATAAGTCATGAAGGGTTGCATAAGAAGGGATGCTTAAAGTGCTTGCAAAATGAAAGATGCATTTGCAGCTCTCAAGAAAATGATATAGATGGTAACGTCATAGTTATACTTCCAGGTGGTGTTCATAGTTCACCAACCGCAGGAGAACCTTCACCATTGATCCATAGATGGAAATTGGGTGGATTGTGTGATTGTGGAGGTTGGGACGTTGGTTGCAAACTGCTTGTTCTCTCTAACCAAAACCTCATTTCAAATATTCCAAGGAGTTCAACATCTTACCTTGAGAGATTTCAACTTTTTGTTCAGGAAGGAGCTGAGCAGAACACACCTCTATTCACTTTGGTGCCTTTGAAGGATGGACTCTACTCAGTTGAATTCAGTTCAACAATCAATCATTTACAGGCATTCTTCATTTCTGTCTCAGTTTTAAGCAGCCAGAAACTACCAAGTTCCTTGGAAATGAATACCATGGAAGAAGAGATCAATAAGAAATTCAGTTCCAAGAACAGCAAAGAACTTCAAGGGAAAGCACCTTTATATTATAATCCAATTCCACCCCTCTCCCCAGTTGACAGAGTTTAA 2844 0.3882 MPCHSDMTKNELLKTSDDMGFGLNLINKSSKRQSRSKTAKDSSDLPQHSPYPRDLDKLKSKSNNVDPQNSDPCHKAKHDVVGKVHHRESARESSSQPDELVKYMSNLPSFLKRSDSGESIQGKALNVGVLDWSQLEKWKSKQTHIRAVASSFTPFNGSEESSSSSSRAATTSSTTVSGHNKNFDGRKDLSSSRIKASYKEGLPKSSKGSSQNVKYQYSEAKARTIRDEHRNTPREFEPRGKTQSDTSLQRVKRNDYDEISSVVGNFVSKSRHDVEAKGRMEGLQQHSLKNKERNLESSSDKGLPSLESKSKGVSFDSQKKMSSRSIEAKKKMDQWQESDIDVGHKHNHRMPSNIVLLRPQRVLQSSSEDYFQHSQSRTSSDEDFSESSRSSSSYVSLQEEDYTKDLYSKVPHSGVLPSVTELASSSETMQHSFNTDLDIDHSSVVSKKPAFLNKMSSLQAEDTSIEKDVLDVNQKNQCAFSNLNKSQDHETAEMIAQNSSSHRWLSLSLSRIGRSFSFKEGSTIPKLSSMYVSANSGLVTSESSAFLDNLSKDKVNGHKRTRSSPYLRLLDPILKHKASNIHHSDEHCVTPKGSMHSISLRTDNLPDEKRSESPIQAILQLTIKNGLPLFKFVLNNERKVLAATMKSLASSAKNDVDCCFTFYLVNEIKKKNGKWMSQRSKEKNCGYVYNIVGQMKVSSSKMTETRKQKNPKRESVVKEYVLMGVEIDQPDQGSPKFIKSKELASVVIEIPCENISHEGLHKKGCLKCLQNERCICSSQENDIDGNVIVILPGGVHSSPTAGEPSPLIHRWKLGGLCDCGGWDVGCKLLVLSNQNLISNIPRSSTSYLERFQLFVQEGAEQNTPLFTLVPLKDGLYSVEFSSTINHLQAFFISVSVLSSQKLPSSLEMNTMEEEINKKFSSKNSKELQGKAPLYYNPIPPLSPVDRV* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1964 947 MobiDBLite consensus disorder prediction 299 321 - -
Apr4g1964 947 MobiDBLite consensus disorder prediction 203 218 - -
Apr4g1964 947 MobiDBLite consensus disorder prediction 153 253 - -
Apr4g1964 947 MobiDBLite consensus disorder prediction 322 336 - -
Apr4g1964 947 MobiDBLite consensus disorder prediction 1 101 - -
Apr4g1964 947 MobiDBLite consensus disorder prediction 153 180 - -
Apr4g1964 947 MobiDBLite consensus disorder prediction 278 336 - -
Apr4g1964 947 PANTHER DUF3527 DOMAIN PROTEIN 23 947 - -
Apr4g1964 947 MobiDBLite consensus disorder prediction 71 95 - -
Apr4g1964 947 MobiDBLite consensus disorder prediction 278 298 - -
Apr4g1964 947 Pfam Domain of unknown function (DUF3527) 739 900 IPR021916 -
Apr4g1964 947 Coils Coil 947 947 - -
Apr4g1964 947 PANTHER EXPRESSED PROTEIN 23 947 - -
Apr4g1964 947 MobiDBLite consensus disorder prediction 366 396 - -
Apr4g1964 947 MobiDBLite consensus disorder prediction 220 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1964 Apr-Chr4 28044578 28049645 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1964 - - gmx:102665747 1273.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1964 4 28044578 28049645 Apr4g1964 4 28044578 28049645 ECH
Apr4g1964 4 28044578 28049645 Apr10g0668 10 16462897 16467216 PCT