Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0668 ATGCCAACCAATATTCAGCCAAGTAGTAATGGATTGTTGAAACCTGCCGAGGATATGAGATTTATTTTAGACTTCAGAAAGAGTGGCTCAAAACAGAATGGCAGCTCAAAGACGGGTAAAGAAAGTTCTGTATTGCCCAATTCGAGTCAAAGTTCAAAGGATGCTGACAAGTTGAAGTCAAAGAGTGGTGCTGGTCCACAATGCAGTGATCGCAAACAAAAGGCCAAGGTGGATGTAGAAGGCAGGATTCAGAACTGGGAAACTGTGAGGAGAAAGGCAATTGAAAGTGATGAGCTTGTCAAGCACATGTCTAATTTACCAGGTTATCTACTGCGTACTGATAGAGTAGAAAATTCTCAAGAGAAAGCTTTCAATGTTGGTGTTCTAGATTGGTCTCGACTGGAGAAATGGAAGCACAAGCATATTCCAGTACTGGCCAGTAATTTTGCATCATTCAATAGCAGCGAATCATTATCAAGAACAGCCACCAAATCATCAATCAGTATTGGCGGCAAGGAAAAACTTAATGATAAGAAAAGTATTCGCTCTTCAGGCATCAAGCCATCTCATAGGGAATGCCTTCCTGAAAGTACCAAACTTCCTTCTTATGATGGCAAACGGCTTGAATCTTCCAAAAATGGAGCTAAGAGTGTTGGAGGTGAGAAAAGAATGACACCCTGGACATTTGAGTCCTTTGGCAAAACTGGCTCAGATACATCCCTTGGAAAGGAGCGGAGGAATGACTATATCAAAAGAAATTCAAAAGTTGAAAATTTTGCATCAAACTCAAGGCTCCATGGGATGTCGTCAGTTCCCAATGAAAAAGCAAATGGTAGGGATGGTGCAGCTAAGCAAAACAAGGCAGGTTTGCAAGAGTATAACCATGGGAATAAGGAGAGAAATCATAAGTCAGGCTCCAATATGGGACAGCCATCACTAAAATTGAAAAACAAAGGGGCGGCCTCATCCAGTTCTAAGAAAATGAGTTGCAGCAGTAGTGAAACCAGGAAAAAGGTGGATCAGTTGCAGGAGTCAGATTTTGACATTGGTAGTAAACACTGCCGTAGCAAGCCAAGTAATATTGTGCTGCTTTGTCCCCATGAAACTCCCCAGTCAAGTTCTTCAGAGGATTTTAGGCTTTCTGAATTAAGAACGTCATCAGATGAAAACATTTCAGAATCAAGCCAAAGTAGTTTGTCATATGTTTCCCTTCCTGAGGAGGTTTACACTGAAAATGAATGCTCTGAAATCCCACTTTCAAGAGCACGGCATTCTGCAGTTGAGCTTTCTTCTTCAGAAACAATGCAACGCAGTATTAATACTGATCTGGGTATGGATCATACTTCTGTTGTATCCATGACTCCAGCTTCCATAAAAAATAAGATGTCTAGTCTGGAATCTGTACGGGCTTGCTTTGAAAAAGATGTGTTAGACACCAAACTGAGAGATCAGTGTATTTTCAGTAATTTGAAGGAATCACTGGACCAAGAAACTGCTGAGCTGACAGCTCAGAAGGAAATGAATCCGTCCCACAACCGCCGGTTTAGCTTCAGCTTAAGTCGGATTGGAAGAAGTTTCAGTTTCAAAGAGGGGTCTACACTTCCACAATCTAGCTCCACGTTTGTCAGTGCAAAGTCTGGTCCAGTAACGCCTCAATCTTCTGTTCGTTGGGATAATCCAAGCAAAGAGAAGGGAAAAAGTCATAACAGAACCAGGTCCAGCTCCTTGCAAAGGTTTTTGGATCCTATATTGAAGCACAAGACATCAGACAAACACCATTCAGCTGAAAGCAGTCAGACACTAGAGAGAAGCGTGAATTCAAGCTTCAGAACCCTCAGTATTAGTGAATCGCTGCTGGCTGAAAAGAGCCAAGGATCATCAATTCAAGGCCTCTTGCAGCTTACAATAAAAAATGGAGTGCCTCTGTTTAAATTTGTGCTCAACAATGAAAGGAAAATTTTTGCTGCTGCCAAGAATAGTTTAACATCAGCGGCGAAGGGTGATTTAGGCTACTGTTTTACGTTCTACCTCGTTAATGAAATAAAGAAGAAGAGTGGTGGATGGATTAGTCATGGAAGTAGAGAAAAAAGCCATGGCTATGCCTACAATATTGTTGCTCAGATGAAGCTTTCCAGCTCTAAAATCACCGAACCAATCAGTCATAACTCCAATACGAAACGCATGGTCAAAGAATATGTTCTATCAGGTGTCGAAATTGGCCAGACAGATCAAGGACCACCAAAGTTCATTCGGAGTGCTGAGCTTGCAGCTGTTGTCATCGAAACCTCATGTGAAAAAATCAGTGAAGTAATGTATGGCAATGATAACTTGCCGAAGAAAGAATGCACTAAGTGCTTGGCAGATGAAAGATGCTCGTGCAGTTCAGGAGAAACTGATACCTCTGGTGGCACTACAGTTATTCTTCCAGGTGGTGTACATGGTTCACCGGTCAAAGGTGAACCTACACCGTTGATATATAGATGGAAAACCGGGGGATCATGTGATTGCGGGGGTTGGGACATTGGTTGCAAACTGCTTGTGCTCTCCAACCAGAAGCAGAGTTCAAATGTTCCAAAATGTTATAAGCCTTACCATGATCGTTTTCAACTTTTTGTTCAGGAAGGAACTGAACAAGACACACCCCATTTCACTTTGTTGCCACTGAAGGATGAATTCTATTCGGTCGAATTCAATTCAACAATCTCTCATTTACAGGCATTTTTCATTTCAGTTGCCGTTTTAAGCGGCCAGAAACTTCCAGGTTCCATGGAAATGGATAGCATGCATGAAGAGATTCTTAAGGAACCCAGTTCCAACAACAGCAAACTTCAGGGGAAAGCACCTTTAAAATATGCTCCAATTCCACCACTCTCCCCTGTTGGTAGGGTTTAA 2892 0.4205 MPTNIQPSSNGLLKPAEDMRFILDFRKSGSKQNGSSKTGKESSVLPNSSQSSKDADKLKSKSGAGPQCSDRKQKAKVDVEGRIQNWETVRRKAIESDELVKHMSNLPGYLLRTDRVENSQEKAFNVGVLDWSRLEKWKHKHIPVLASNFASFNSSESLSRTATKSSISIGGKEKLNDKKSIRSSGIKPSHRECLPESTKLPSYDGKRLESSKNGAKSVGGEKRMTPWTFESFGKTGSDTSLGKERRNDYIKRNSKVENFASNSRLHGMSSVPNEKANGRDGAAKQNKAGLQEYNHGNKERNHKSGSNMGQPSLKLKNKGAASSSSKKMSCSSSETRKKVDQLQESDFDIGSKHCRSKPSNIVLLCPHETPQSSSSEDFRLSELRTSSDENISESSQSSLSYVSLPEEVYTENECSEIPLSRARHSAVELSSSETMQRSINTDLGMDHTSVVSMTPASIKNKMSSLESVRACFEKDVLDTKLRDQCIFSNLKESLDQETAELTAQKEMNPSHNRRFSFSLSRIGRSFSFKEGSTLPQSSSTFVSAKSGPVTPQSSVRWDNPSKEKGKSHNRTRSSSLQRFLDPILKHKTSDKHHSAESSQTLERSVNSSFRTLSISESLLAEKSQGSSIQGLLQLTIKNGVPLFKFVLNNERKIFAAAKNSLTSAAKGDLGYCFTFYLVNEIKKKSGGWISHGSREKSHGYAYNIVAQMKLSSSKITEPISHNSNTKRMVKEYVLSGVEIGQTDQGPPKFIRSAELAAVVIETSCEKISEVMYGNDNLPKKECTKCLADERCSCSSGETDTSGGTTVILPGGVHGSPVKGEPTPLIYRWKTGGSCDCGGWDIGCKLLVLSNQKQSSNVPKCYKPYHDRFQLFVQEGTEQDTPHFTLLPLKDEFYSVEFNSTISHLQAFFISVAVLSGQKLPGSMEMDSMHEEILKEPSSNNSKLQGKAPLKYAPIPPLSPVGRV* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0668 963 MobiDBLite consensus disorder prediction 530 558 - -
Apr10g0668 963 MobiDBLite consensus disorder prediction 366 397 - -
Apr10g0668 963 MobiDBLite consensus disorder prediction 303 330 - -
Apr10g0668 963 MobiDBLite consensus disorder prediction 24 77 - -
Apr10g0668 963 Pfam Domain of unknown function (DUF3527) 749 915 IPR021916 -
Apr10g0668 963 Pfam Domain of unknown function (DUF3527) 628 737 IPR021916 -
Apr10g0668 963 MobiDBLite consensus disorder prediction 254 270 - -
Apr10g0668 963 MobiDBLite consensus disorder prediction 366 380 - -
Apr10g0668 963 PANTHER EXPRESSED PROTEIN 24 963 - -
Apr10g0668 963 MobiDBLite consensus disorder prediction 239 253 - -
Apr10g0668 963 MobiDBLite consensus disorder prediction 530 574 - -
Apr10g0668 963 PANTHER DUF3527 DOMAIN PROTEIN 24 963 - -
Apr10g0668 963 MobiDBLite consensus disorder prediction 161 344 - -
Apr10g0668 963 MobiDBLite consensus disorder prediction 28 53 - -
Apr10g0668 963 MobiDBLite consensus disorder prediction 171 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0668 Apr-Chr10 16462897 16467216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0668 - - ccaj:109816050 1387.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0668 10 16462897 16467216 Apr10g0668 10 16462897 16467216 ECH
Apr4g1964 4 28044578 28049645 Apr10g0668 10 16462897 16467216 PCT