Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1931 ATGGCCGAAACGAAGTTGAGTATAAAGGACCAAAGATGGTCACTCCATGGAATGACTGCTCTAGTGACCGGAGGCACCCGAGGCATAGGGTATGCCATTGTAGAAGAATTAGAAGAATTTGGGGCAGCTGTTCATGTATGTGCACGTACTCAAGATGATGTTAATAAATGTTTGGAAGAGTGGAAAAGCAAGGGACTTAATGTGACAGGTTCAGTATGTGATATACTATACTGCGACCAACGTAAAAGATTAATGGAAACTGTTTCCTCCATTTTTCACGGAAAGCTCAACATTCTAGTAAGACTCAACTGGAATGAGACTGTGGATATTGCAGTGTCTCAAGCACCCGTGAATCGCTTGGGAGAGCCGAAAGAGATATCAGCATTAGTAGCTTTTCTTTGCCTTCCGGCAGCATCGTTCATCACTGGACAGGTTATAGCCGTTGATGGTGGTTACACTTCCTAA 465 0.4366 MAETKLSIKDQRWSLHGMTALVTGGTRGIGYAIVEELEEFGAAVHVCARTQDDVNKCLEEWKSKGLNVTGSVCDILYCDQRKRLMETVSSIFHGKLNILVRLNWNETVDIAVSQAPVNRLGEPKEISALVAFLCLPAASFITGQVIAVDGGYTS* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1931 154 PANTHER TROPINONE REDUCTASE 105 153 IPR045000 GO:0016491
Apr4g1931 154 PANTHER TROPINONE REDUCTASE 1 100 IPR045000 GO:0016491
Apr4g1931 154 Pfam Enoyl-(Acyl carrier protein) reductase 108 153 - -
Apr4g1931 154 Pfam short chain dehydrogenase 19 100 IPR002347 -
Apr4g1931 154 Gene3D - 2 102 - -
Apr4g1931 154 PANTHER ENOYL-(ACYL CARRIER) REDUCTASE 105 153 - -
Apr4g1931 154 PANTHER ENOYL-(ACYL CARRIER) REDUCTASE 1 100 - -
Apr4g1931 154 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 153 IPR036291 -
Apr4g1931 154 Gene3D - 103 154 - -
Apr4g1931 154 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Apr4g1931 154 PRINTS Glucose/ribitol dehydrogenase family signature 116 136 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1931 Apr-Chr4 27430447 27432442 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1931 10 100 Miscellaneous Gene Families AT2G29340 62.637 7.04e-36 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1931 K08081 - gmx:100786456 176.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1931 4 27430447 27432442 Apr10g2049 10 33297293 33303772 ECH
Apr4g1931 4 27430447 27432442 Apr4g1931 4 27430447 27432442 ECH