Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1927 ATGTCTTCTACTGTAGAAGAGTCGATTCGTGACCCTCTCAACAAGGCATGGAAAACCCTTCGTTTCTTCACCATCAAACCCACCGAACTACTCCCTCTATTCCTCAAAACGGGGCTCGCTATTTCCACCTTCATCCTCATCACCCTCTTTTTCTACCTCACCCTCTCCTACCACCAACCCTTTCTGCACAACACTCACACAACCTTCAAATACAGTCTCCAACAACATAGACCCTCCGAAGAACCCACCAACATCTCCCACATCTTGTTCGGGATAGGCGGCTCCACCGCCACATGGCACTCGCGCCGCCACTACAGTGAGCTCTGGTGGCGCCATGGCGCGACCAGAGGCTTCGTTTGGCTGGACAAAAGCCCGCCGGAAAACGAGACGTGGCCGGAGATGTCGCCGCCGTACATGGTCTCCGGTGACACGTCGTCGTTTACGTACACGTGCCCGTACGGCTCACGGTCTGCGATTCGCATGACGCGGATAGTAAAGGAGAGCTTCGAGCTAGGAATGGAGAATGTGAGGTGGTTCGTGATGGGTGATGATGACACGGTGTTCTTCCCCGACAACCTGGTTACGGTTTTGTCGAAGTATGATCATAATGAAATGTACTACGTTGGTGGGAACTCGGAGAGCGTGGAGCAAGATGTGATACACTTTTACACCATGGCCTATGGCGGTGGTGGGTTCGCTATAAGTTACCCTTTGGCTGCTGAGTTAGTGAAGATTTTGGACGGTTGCATTGATCGTTATGCTCAGTTCTATGGCTCTGATCAGAGGATTCAGAGTTGTATCAGTGAGATTGGTGTTCAGATCACCAAAGAGCCGGGTTTTCATCAGGTTGATATACGTGGGAACCCATATGGGTTGTTATCGGCACACCCCGTAGCACCGTTGGTGTCGTTGCATCATTTGGACAACGTGGACCCGATATTCGCAAACATGACACGGATTGAGTCCGTGAGAAAGTTGGTCACAGCCTATAAAACGGATCCGGGTCGGACCCTACAACAGAGTTTCTGTTACGACTTGCGGCGGAATTGGTCCGTCTCGGTGTCGTGGGGCTTCACCGTGCAGTTGTATCCTTTTCTAGCCACGGCGAAGGAGCTGGAAACGGCGTTAAGGACATTTGACACGTGGCGGAGTTGGAGTGATGGTCCGTTTACTTTCAATACCCGACCCGTTAGTAGCGACCCATGTCAGAAGCCCCTCCTGTATTTTATGGATCGGGTTCAAAGTGTGGGCGGGGACCAGACCCGATCTACCTACCAAAGATACGTCGACGTTTCGGAGAAAAAATGTGGGCGTGCTGAGTACGACCGGGCTTTAGCCGTTCAATACGTCGACGTTTCGGCATCCCGCTTTATGCCGGACTTGTGGAAAAAGGCGCCATGTAGACAATGCTGCGAGATAATCAACGGCCGAGATGGGGTGAACAGGACGATGCACGTTAAGATCAGAGGGTGTCGTCGGTTTGAGAGTGTGACACCTCCGTAA 1503 0.521 MSSTVEESIRDPLNKAWKTLRFFTIKPTELLPLFLKTGLAISTFILITLFFYLTLSYHQPFLHNTHTTFKYSLQQHRPSEEPTNISHILFGIGGSTATWHSRRHYSELWWRHGATRGFVWLDKSPPENETWPEMSPPYMVSGDTSSFTYTCPYGSRSAIRMTRIVKESFELGMENVRWFVMGDDDTVFFPDNLVTVLSKYDHNEMYYVGGNSESVEQDVIHFYTMAYGGGGFAISYPLAAELVKILDGCIDRYAQFYGSDQRIQSCISEIGVQITKEPGFHQVDIRGNPYGLLSAHPVAPLVSLHHLDNVDPIFANMTRIESVRKLVTAYKTDPGRTLQQSFCYDLRRNWSVSVSWGFTVQLYPFLATAKELETALRTFDTWRSWSDGPFTFNTRPVSSDPCQKPLLYFMDRVQSVGGDQTRSTYQRYVDVSEKKCGRAEYDRALAVQYVDVSASRFMPDLWKKAPCRQCCEIINGRDGVNRTMHVKIRGCRRFESVTPP* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1927 500 PANTHER GLYCOSYLTRANSFERASE 26 497 - -
Apr4g1927 500 Pfam Protein of unknown function, DUF604 217 471 IPR006740 -
Apr4g1927 500 Gene3D - 75 344 - -
Apr4g1927 500 PANTHER FRINGE-RELATED 26 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1927 Apr-Chr4 27353332 27355915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1927 8 499 Glycosyltransferase AT2G37730 58.008 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1927 - - gmx:100813750 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1927 4 27353332 27355915 Apr10g2046 10 33273489 33278784 ECH
Apr4g1927 4 27353332 27355915 Apr4g1927 4 27353332 27355915 ECH