Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2046 ATGGATAAGAAAATGAATCACACTCGCATGGAACCTTGTCATGACCCACTTAAAGTATCAAAAATCCCTTTAGTTTCAGACAAATTGGCTGATATGGTTATAACCTTAATAAGGATTGGCATACTTATATGCCTTATTGCATCCATATCACTTGCTCTTCATGCAGCATTCTCGAAACCAGACCGTTGGTTCCCATTACCAGAACATTTACATGCCTTCCACAATGCTTCAGTCACTGACAATGAACCCACAAACATCTCACACATTCTATTTGGCATTGCTGGTTCAGCAAACACATGGCTTGACCGTAGCAACTACAGTAAGCTATGGTGGAATCCAAACACCACTCGAGGCTTTGTTTGGCTTGACAAGAAACTTGATATTATGCACCCTGATATGTTAGTGCCATATCAAATCTCACAGGGCTGGACTCAGTTTAAGTATGTGCACTCAGCATCTGCAGTTCGGATAGCTCGAATAGTTTATGAGAGCTTTAAACTCGGTTTGCCAAATGTTAGGTGGTTTGTAATGGGAGATGATGATACTGTGTTTTTTACCGAGAACTTAGTTACTGTGTTGGGAAAATATGATCACAATCAAATGTATTATATTGGTGGAAGTTCTGAGAGTGTGGAGCAAGATGTGATGCATTCTTATAACATGGCATTTGGTGGTGGTGGATTTGCAGTTAGTTATGCATTAGCAGCTCAACTAGCCAAAATAATGGATGGTTGTCTCCAAAGATACTTCTATTTTTATGGTTCTGATCAAAGGGTGTGGGCCTGTGTGCATGAAATTGGGGTGCCTCTTACCAAAGAAAGTGGATTCCACCAGCTTGACTTAAGGGGGAATCCATATGGTCTTCTAGCAGCACACCCCTTGGCACCACTTGTATCACTCCATCACCTTGACTATTTGGACCCACTGTTTCCCAACCAGACTCAAACACATTCACTTAAAAAGCTCATCAGTGCATACCACATTGACCCTGCCCGGATACTGCAGCAAAGTTTTTGCTATGATCATAATCGTAGATGGTCAATATCTATTTCTTGGGGTTACACAATACAAATCTATACAACATTGTTGATAGCAGCAGATTTGCAGATGCCATTGCAGACTTTTCGGACCTGGCGAAGTTGGAAGGATGGTCCTTTCATATTTAATACTAGACCTATGAGCTCTGACCCATGCCAGCAGCCGGCTACATTTTTCCTGGACCAGGTTACAAAGGTGGGAACGAGTGGAAGTATCTCTATCTACAAGAGGCATGCAGGCAATAAAGCAAAGTGCAAGAGAGAAGGCATTAATAATGTAGAAGTGCAAAGAGTTAGGGTCTCTGCCTTGAAGCTGGATCCAGAATATTGGAAGAATGTACCACGGAGGCATTGCTGCCAATTTATGGATGGTGGAAGCATAAAGGATGGCAGTATCCATATCAGGATTAGGAAATGCAGACCTCAGGAAACAATTACTATATAG 1482 0.4184 MDKKMNHTRMEPCHDPLKVSKIPLVSDKLADMVITLIRIGILICLIASISLALHAAFSKPDRWFPLPEHLHAFHNASVTDNEPTNISHILFGIAGSANTWLDRSNYSKLWWNPNTTRGFVWLDKKLDIMHPDMLVPYQISQGWTQFKYVHSASAVRIARIVYESFKLGLPNVRWFVMGDDDTVFFTENLVTVLGKYDHNQMYYIGGSSESVEQDVMHSYNMAFGGGGFAVSYALAAQLAKIMDGCLQRYFYFYGSDQRVWACVHEIGVPLTKESGFHQLDLRGNPYGLLAAHPLAPLVSLHHLDYLDPLFPNQTQTHSLKKLISAYHIDPARILQQSFCYDHNRRWSISISWGYTIQIYTTLLIAADLQMPLQTFRTWRSWKDGPFIFNTRPMSSDPCQQPATFFLDQVTKVGTSGSISIYKRHAGNKAKCKREGINNVEVQRVRVSALKLDPEYWKNVPRRHCCQFMDGGSIKDGSIHIRIRKCRPQETITI* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2046 493 Pfam Protein of unknown function, DUF604 213 465 IPR006740 -
Apr10g2046 493 Gene3D - 77 346 - -
Apr10g2046 493 PANTHER BNAA05G27650D PROTEIN 13 491 - -
Apr10g2046 493 PANTHER FRINGE-RELATED 13 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2046 Apr-Chr10 33273489 33278784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2046 14 491 Glycosyltransferase AT3G11420 56.539 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2046 - - gmx:100802549 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1927 4 27353332 27355915 Apr10g2046 10 33273489 33278784 ECH
Apr10g2046 10 33273489 33278784 Apr10g2046 10 33273489 33278784 ECH