Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1795 ATGTATTCTGATCGGGTGGAGAGTGGAAGTAGGAAGTCAGTGAAGGAACGCCTTAATGGGATTCTTTTCACTGATTGTACTCGCCAACGCAAAATCACTGGAAAGAGGCAGAGGCAAGATGACAAGTGGGAACATGATCTCTATGAAGACAATGAACCCCGGCTCTCTAATCGCAAGGTCACTGCTCAAGATCTTCGTTTGAAGCTTCAGAAGAAAGGTCTTCACCCTGGAGCTCAAACTGGAAAGAGTTCTGTTCCTAGTGTGCGGGATCTTCGTGAAAAGCTTTCAGGGACAATAGCTCCACAACCTAAAATCTATGACCCACCTAAACCAAAAGTGCCTGTTAAACCAAGCAGTAAAAGTATCGTTGAGGCCCATGCAGGACATATCAAAAGATCAGCTAACCCAGCACCTAAAAAGTTGTCCCAAAAGGCTGATGCATCAGTGGATGAATTCTTGCAGTCCTTGGGTCTTGAAAAGTATCTCATAAGTTTTCAGGCTGAAGAGGTTGATATGACTGCACTCAATCATATGACTGATGAGGATCTCAAGGCGATGGGTATACCAATGGGACCGAGAAAGAAGATTCTTTTAGCCTTGGAGTCGACAGGCTAA 615 0.4472 MYSDRVESGSRKSVKERLNGILFTDCTRQRKITGKRQRQDDKWEHDLYEDNEPRLSNRKVTAQDLRLKLQKKGLHPGAQTGKSSVPSVRDLREKLSGTIAPQPKIYDPPKPKVPVKPSSKSIVEAHAGHIKRSANPAPKKLSQKADASVDEFLQSLGLEKYLISFQAEEVDMTALNHMTDEDLKAMGIPMGPRKKILLALESTG* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1795 204 Pfam SAM domain (Sterile alpha motif) 144 201 IPR001660 GO:0005515
Apr4g1795 204 MobiDBLite consensus disorder prediction 97 117 - -
Apr4g1795 204 Gene3D - 147 203 IPR013761 -
Apr4g1795 204 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 124 191 - -
Apr4g1795 204 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 103 - -
Apr4g1795 204 PANTHER OSJNBA0060P14.15 PROTEIN 124 191 - -
Apr4g1795 204 PANTHER OSJNBA0060P14.15 PROTEIN 1 103 - -
Apr4g1795 204 ProSiteProfiles SAM domain profile. 144 198 IPR001660 GO:0005515
Apr4g1795 204 SMART SAM_4 141 204 IPR001660 GO:0005515
Apr4g1795 204 CDD SAM_superfamily 148 201 - -
Apr4g1795 204 MobiDBLite consensus disorder prediction 31 58 - -
Apr4g1795 204 SUPERFAMILY SAM/Pointed domain 146 201 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1795 Apr-Chr4 24729238 24737793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1795 37 202 Glycosyltransferase AT3G07170 60.479 3.87e-63 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1795 - - gmx:100527300 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1795 4 24729238 24737793 Apr4g1795 4 24729238 24737793 ECH
Apr4g1795 4 24729238 24737793 Apr10g0374 10 9231121 9239471 PCT