Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0374 ATGTATGCTGATCGGGTGGACAGTGGAGCGAGGAGGTCCGTGAAGGAACGCCTTAATGGGAATGGTATCAGTGACTCTTCTCGGCAACAACGCCAAATCACCGGCAAGAGGTTGAGACAAGATGACAAGTGGGAACATGATCTCTTTGATGATGATGAACCTCGGATCACTAATCGCAAAGTTACTGCTCAAGATCTTCGCCTCAAGCTTCAAAGGAAAGGTCTTCAACCTGCAACTCAGAGTGGAAAGAGTTCAGCTCCAAACACACGGGATCTCCGTGAAAGGCTATCTGGGACAATGACTCCACAACCTACAAATTCTGATCCACCAAAGTCAAAAGTGGTTGTTAAACCAAGCAGTAAAAATGTCAGTGTTGAGGCCCCTGCAGTACAGATCAAAAGGCCAGCTAATTCTGCTCCTAAAAAGTTGTCACGGAAGGCTGATATATCAGTGGATGAATTTTTGCAGTCTTTGGGTCTCGAAAAGTATGTCATAACTTTTCAGGCTGAAGAAGTTGATATGGCAGCTCTCACTCATATGACTGATGAAGATCTCAAGGTTATGGGCATACCAATGGGGCCGAGAAAGAAGATACTTTTAGCATTGGAGTCAAAAGTCTGA 621 0.4493 MYADRVDSGARRSVKERLNGNGISDSSRQQRQITGKRLRQDDKWEHDLFDDDEPRITNRKVTAQDLRLKLQRKGLQPATQSGKSSAPNTRDLRERLSGTMTPQPTNSDPPKSKVVVKPSSKNVSVEAPAVQIKRPANSAPKKLSRKADISVDEFLQSLGLEKYVITFQAEEVDMAALTHMTDEDLKVMGIPMGPRKKILLALESKV* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0374 206 MobiDBLite consensus disorder prediction 74 116 - -
Apr10g0374 206 ProSiteProfiles SAM domain profile. 150 206 IPR001660 GO:0005515
Apr10g0374 206 MobiDBLite consensus disorder prediction 1 42 - -
Apr10g0374 206 Pfam SAM domain (Sterile alpha motif) 148 203 IPR001660 GO:0005515
Apr10g0374 206 SUPERFAMILY SAM/Pointed domain 149 203 IPR013761 -
Apr10g0374 206 CDD SAM_superfamily 150 203 - -
Apr10g0374 206 PANTHER OSJNBA0060P14.15 PROTEIN 124 192 - -
Apr10g0374 206 PANTHER OSJNBA0060P14.15 PROTEIN 1 108 - -
Apr10g0374 206 SMART SAM_4 143 206 IPR001660 GO:0005515
Apr10g0374 206 MobiDBLite consensus disorder prediction 70 116 - -
Apr10g0374 206 Gene3D - 149 206 IPR013761 -
Apr10g0374 206 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 124 192 - -
Apr10g0374 206 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0374 Apr-Chr10 9231121 9239471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0374 39 205 Glycosyltransferase AT3G07170 58.929 5.12e-63 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0374 - - gmx:100784706 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0374 10 9231121 9239471 Apr10g0374 10 9231121 9239471 ECH
Apr4g1795 4 24729238 24737793 Apr10g0374 10 9231121 9239471 PCT