Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1791 ATGGAGCAACGTTCTCATGTTCCAAAGTTTGGAAATTGGGAGAGTGGAGAGAATGTTCCTTATACAGCTTATTTTGACAAAGCCCGGAAAGGTCGACCTGGTTCAAAGATGATTAATCCAAATGATCCTGAGGAAAATTCAGATCTAGTTTCTTCTGCTGACATACCCCTTTCAAAACCCGGAGTTGATTCAGAGGATCCATCTGCAAAGGGATCAGGGAGATCAACACATGAGTTACAAAAGAGTAGGGAGGATAGTGATCCCAAACAGTTTATTGACTCTCCGGCTCGTCATGACAATGCAAGCAACAGGAGTGGGAGTGATTATGCCCATCGGCATGGAGTAGCTTCTGCTGACAACCGTAGAAGACCTTCAAGACAAAGTACTGGGTCTGAATACAGCATTGACCGCTCACCCCTTCATCGCCAGGCAAAAGCCCCTGGCAGAGATAGTCCTTCTTGGGAAGGAAAGAATTCATATGACAGCAGCCATGGAACACCAGGAAGGTCCCGATTAAGACCACTTAACCGAGGGGATGAAACTCCTGATAAAGGTGCTGCTGTTCCGAAATTTGGTGAGTGGGATGAGAGTAACCCTGCATCAGCTGATGGCTATACTCACATTTTCAACAAAGTGCGTGAGGAGAAACAGGTTGGGACCGGACATGTGCCAGGCACACCAAATGGGAGACAATATGTTGTTGGGAACCAACCTGCCAATGACAAAGCTCAGAGTTGCTGTTTCTGCTGGGGGAAAAAATGA 762 0.4672 MEQRSHVPKFGNWESGENVPYTAYFDKARKGRPGSKMINPNDPEENSDLVSSADIPLSKPGVDSEDPSAKGSGRSTHELQKSREDSDPKQFIDSPARHDNASNRSGSDYAHRHGVASADNRRRPSRQSTGSEYSIDRSPLHRQAKAPGRDSPSWEGKNSYDSSHGTPGRSRLRPLNRGDETPDKGAAVPKFGEWDESNPASADGYTHIFNKVREEKQVGTGHVPGTPNGRQYVVGNQPANDKAQSCCFCWGKK* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1791 253 MobiDBLite consensus disorder prediction 24 199 - -
Apr4g1791 253 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 182 217 IPR008700 -
Apr4g1791 253 MobiDBLite consensus disorder prediction 218 237 - -
Apr4g1791 253 MobiDBLite consensus disorder prediction 70 94 - -
Apr4g1791 253 MobiDBLite consensus disorder prediction 173 190 - -
Apr4g1791 253 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 250 IPR040387 -
Apr4g1791 253 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED 1 250 - -
Apr4g1791 253 MobiDBLite consensus disorder prediction 121 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1791 Apr-Chr4 24614545 24618113 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1791 K13456 - gmx:100499220 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1791 4 24614545 24618113 Apr10g0368 10 9086386 9090236 PCT