Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1014 ATGAAGCAATCTCATCGGTGGCAGAGGACTCTGATCCTCTCTCTGCTCTCTCTCTCCGTCCTTGCTCCTCTCGTTTTCGTCTCTCACAGGCTTCAATTTCTCACTCCCGATGGACGAAGAGAGTTTCTTGATGATTTATCGAGTGTTACATACATGACAGATCCTTTACGGCTAAATGCTATTGAACAGGAAGGCGCTGAAGAATTAGAAGAGCCAAAGCAAGTTGTTTATAAAGAAAAAGATTTTGGTTCGACAAATAGTTACATTTCGGAAAAGATTAATGATTCTGACGAATCTAAAATTGAGCAGTTGAGAAATAACCTTTTGGAAAGAAAAGTTTCAGAAGTCGACCATGACAAAAGACAAGAACAGGAAGCTCAGCAGAAAGGACTAGTATCCATAAATGGGGATGAGAAAATATATAATACAACAGTTACCCACAATCAGAATATGCATATTCAATCGCAGAGAATGACAGATGAGAATATAGAAGGGACAAATAAGCAATCTGGTCTAACAGCAACCCAACATCATCAGATTTCACGCCGTCAGTCTCAGAGAGTTACAAATCGTAAGGTTGAGGAGATTAAGGATCAAATTATTAGAGCCAGAGCATACTTGGGCTTTGCTCCACCAAGCAGCAACTCACACTTGGTGAAAGAGTTGAAGCTGAGAATTAGAGAGATGGAACGTGCAGTTGGAGAAGCTACCAAGGATTCAGATCTGTCAAGGAGTGCTTTGCAGAAAATGAGACACATGGAAGGTACACTGTCTAAAGCCAACCGTGCTTTCCCAGACTGCAATGCCATGGCTACTAAGCTCCGTGCTATGAATCATAATGCTGAAGAGCAAGTTCGTTCTCAACAACACCAAGCAACATATCTCGTTCATCTTGCTGCAAGGACCACTCCAAAAGGTCTCCACTGTCTTTCTATGCAGCTAACTGCTGATTACTTTGCCTTGAGAACTGAGGACCGGAGGCTTCCAGATGAAAATAAGATTCATGATCCAAAACTCTATCATTATGCTGTCTTCTCTGACAATGTTCTGGCATGTGCAGTGGTTGTGAATTCCACTGTCTCTAATGCTAAGGAACAGACGAAAATTGTTTTCCATGTTGTGACCAATTCACTCAACTTTCCTGCAATCTGGATGTGGTTCTTATTAAACCCTCCTGGCAAAGCTACAGTTCATATACAAAGCATAGAGAACTTTGAATGGTTGTCCAAGTACAATATATTCAAGAAACATAATTCCAGTGATCCAAGATATACTTCTGAGTTGAACTATCTGCGTTTCTACCTGCCAGATGTCTTCCCTACCCTAAATAAGGTTTTGCTTTTTGATCATGATGTGGTGGTGCAACAAGATCTCAGTAGACTATGGAATGCCAATATGAACAGAAAAGTAATTGCAGCAGTTGGGACTTGTCAAGAAGGTGAAACTTCATTTCACAGGATGGATATGTTCATAAACTTCTCAGATCCATTCATTGCAAAGAGGTTTGATGTCAATGCTTGTACATGGGCATTCGGGATGAACTTGTTTGATTTACAGCAGTGGAGGAGACATAATTTAACTGCAATCTATCACAAATATTTGCAAATGGGTTCCAAACGGCCATTGTGGAACATTGGAAGTCTGCCTTTAGGCTGGATCACCTTCTATAACAGGACTATGGTTTTGGACAGACGGTGGCACATTCTTGGTCTTGGTTACAACTCAGATGTCGATAGAAATAAGATTGAGCGGGCTGCCGTTATACACTATGACGGAATTAGGAAGCCGTGGTTGGATATTGCAATGGGAAGATATAAAAGTTATTGGACCAAATTTATTAAGTTTGACCACCCTATTTTGCAACGTTGCAATCTCCAGGCGTAG 1884 0.4098 MKQSHRWQRTLILSLLSLSVLAPLVFVSHRLQFLTPDGRREFLDDLSSVTYMTDPLRLNAIEQEGAEELEEPKQVVYKEKDFGSTNSYISEKINDSDESKIEQLRNNLLERKVSEVDHDKRQEQEAQQKGLVSINGDEKIYNTTVTHNQNMHIQSQRMTDENIEGTNKQSGLTATQHHQISRRQSQRVTNRKVEEIKDQIIRARAYLGFAPPSSNSHLVKELKLRIREMERAVGEATKDSDLSRSALQKMRHMEGTLSKANRAFPDCNAMATKLRAMNHNAEEQVRSQQHQATYLVHLAARTTPKGLHCLSMQLTADYFALRTEDRRLPDENKIHDPKLYHYAVFSDNVLACAVVVNSTVSNAKEQTKIVFHVVTNSLNFPAIWMWFLLNPPGKATVHIQSIENFEWLSKYNIFKKHNSSDPRYTSELNYLRFYLPDVFPTLNKVLLFDHDVVVQQDLSRLWNANMNRKVIAAVGTCQEGETSFHRMDMFINFSDPFIAKRFDVNACTWAFGMNLFDLQQWRRHNLTAIYHKYLQMGSKRPLWNIGSLPLGWITFYNRTMVLDRRWHILGLGYNSDVDRNKIERAAVIHYDGIRKPWLDIAMGRYKSYWTKFIKFDHPILQRCNLQA* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1014 627 MobiDBLite consensus disorder prediction 168 190 - -
Apr4g1014 627 Pfam Glycosyl transferase family 8 309 601 IPR002495 GO:0016757
Apr4g1014 627 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 342 617 IPR029044 -
Apr4g1014 627 MobiDBLite consensus disorder prediction 168 183 - -
Apr4g1014 627 Coils Coil 271 291 - -
Apr4g1014 627 PANTHER HEXOSYLTRANSFERASE 1 626 - -
Apr4g1014 627 Coils Coil 219 239 - -
Apr4g1014 627 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 1 626 IPR029993 GO:0047262
Apr4g1014 627 SUPERFAMILY Nucleotide-diphospho-sugar transferases 340 624 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1014 Apr-Chr4 8332942 8340103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1014 1 627 Glycosyltransferase AT1G06780 49.844 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1014 K13648 - gmx:100793193 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1014 4 8332942 8340103 Apr8g0287 8 2397026 2401948 PCT