Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0968 ATGGAAAAGGAGAAAATTTCGAGTGCACCAAAGCGTGCAGTGTGCACATGCATCACCATCTTCCTCCTCTTAGTCGGCATCACTCTACTCGTTCTCTGGCTTGTCTACCGTCCACACAAGCCTCGCTTCGTGGTGGTCGGCGCCGCCATCTACGGCCTCAATACAACCACGCCACCCCTCATGTCAGCCACCATGCAGTTCACCGTCCTCATTAGGAACCCAAACAGGCGCGTCTCCGTTTACTATGACAGGTTCTCTGCCTTCGTCTCCTACAGGAACCAAGCCATAACGCCCCAGGTATTGCTGCCACCGCTGCACCAGGAGAAGCACAGCACGGTGTCGGTGTCGCCGGTGATCGGAGGCACGGCGGTTCCGGTGTCGGTGGAGGTTTCAAATGGGTTGATGGTGGACGAGGCTTATGGTGTGGTGGGTCTGAAGCTGATATTTGAGGGTAGGGTGAGGTGGAAGGCTGGGGCCATTAAAACTGCGCATTATGGACTCTATGTTAAGTGTGACTTATTGATGGGTTTCAAGAAAGGTTTTATGGGTCAAGCTCCTCTTCTCGGAGCTCAACCTTGCGATGTTGATGTATGA 594 0.5354 MEKEKISSAPKRAVCTCITIFLLLVGITLLVLWLVYRPHKPRFVVVGAAIYGLNTTTPPLMSATMQFTVLIRNPNRRVSVYYDRFSAFVSYRNQAITPQVLLPPLHQEKHSTVSVSPVIGGTAVPVSVEVSNGLMVDEAYGVVGLKLIFEGRVRWKAGAIKTAHYGLYVKCDLLMGFKKGFMGQAPLLGAQPCDVDV* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0968 197 Pfam Late embryogenesis abundant protein 68 170 IPR004864 -
Apr4g0968 197 PANTHER OS05G0367900 PROTEIN 8 196 IPR044839 GO:0098542
Apr4g0968 197 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 8 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0968 Apr-Chr4 7898829 7899704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0968 8 173 EF-hand Containing Proteins AT5G21130 21.893 1.11e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0968 - - gmx:100804161 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0968 4 7898829 7899704 Apr4g0968 4 7898829 7899704 ECH
Apr10g1165 10 23888679 23889386 Apr4g0968 4 7898829 7899704 ECH