Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1165 ATGGAAGACATGCAAATACAACATCAAGAAGACCCAACCCAACAACAACAACAACAACAACATCACCAATTCCGTGGCAAAGTGCCCCAACAGCTGGTGCACAACATGGACAAAGGTATACCTCGTTTCAAACCCAATGCTCCAAAACGTGAACACTGCATATGCATCACCGTTTTCCTCCTCTTACTTGGTATCATAATCCTCATCCTCTGGCTCGCCTACCACCCCTCTAAGCCAAGCTTCACGGTGGCCAGCGCCGCCATCTACGGCCTCAACACAACCTCACCGCCACTCATGTCCATCACCATGCAATTCAACATCCTCATACGGAACCCAAACAAGCGTGTCTCAATTAACTTTGATAGGCTTTCTGCATATGTGTCCTATAGAAACCAACCCATCACACCACATGTCATGTTGCCACCACTCTTCTTAGAGAAACACAGCACCGTGTCCTTGTCGCCGGAGATCGGAGGCATGCCGGTGCCGGTGTCGGAGGAGGTCTCCAATGGGTTGGCAATGGATGAGACATATGGGGTAGTGGGTGTGAAACTTGTCTTTCTTGGAAGGTTGAGGTGGAAAGCTGGTGACATAAACTCTGCACATTATGGTTTGTATGTGAAGTGTGACATTTTGATGGGTTTGAGGAAAGGTTTTGTGGGTCAGGTTCCTCTTCTCGGAGCTCCAGTTTGTGATGTGGATACTTGA 708 0.4845 MEDMQIQHQEDPTQQQQQQQHHQFRGKVPQQLVHNMDKGIPRFKPNAPKREHCICITVFLLLLGIIILILWLAYHPSKPSFTVASAAIYGLNTTSPPLMSITMQFNILIRNPNKRVSINFDRLSAYVSYRNQPITPHVMLPPLFLEKHSTVSLSPEIGGMPVPVSEEVSNGLAMDETYGVVGVKLVFLGRLRWKAGDINSAHYGLYVKCDILMGLRKGFVGQVPLLGAPVCDVDT* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1165 235 MobiDBLite consensus disorder prediction 1 27 - -
Apr10g1165 235 MobiDBLite consensus disorder prediction 8 26 - -
Apr10g1165 235 PANTHER OS05G0367900 PROTEIN 30 235 IPR044839 GO:0098542
Apr10g1165 235 Pfam Late embryogenesis abundant protein 107 202 IPR004864 -
Apr10g1165 235 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 30 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1165 Apr-Chr10 23888679 23889386 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1165 - - gsj:114419181 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1165 10 23888679 23889386 Apr10g1165 10 23888679 23889386 ECH
Apr10g1165 10 23888679 23889386 Apr4g0968 4 7898829 7899704 ECH