Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0922 ATGGCACCAAGAAACAGTCGTGGCAAAGGCAAGGGAGAGAAGAAGAAGAAGGAAGAAAAGGTTCTTCCGGTTGTAATGGATATCACTGTGAACCTCTCTGATGGAACTCATGTTATTCTCAAGGGTATATCAACGGACAGAATAATAGATATTCGTCGGCTTTTATCGGTGAATGTGGAGACCTGTCATATCACCAATTTTTCCCTATCACACGAGGTTAGAGGGCAACAATTGAAGGACCCGGTGGACGTGTTCGCACTGAAGCCATGCGTCCTCACACTGAACGAAGAGGATTATGACGAAGATAGAGCGGTGGCCCACGTCAGACGGCTACTGGATATCGTGGCCTGCGCCACGAACTTGGGCCACTCGCCGGCGGCGAAGAATGGCAACTCTCAAACGGCGGCGACGGAGGTGGTTGACGGAGACAGCGAGATAAGCCACTCGTGTCCTAGGCTCGGGAGCTTCTACGAGTTCTTCTCTCTTTCGCATCTCACTCCTCCTCTCCAATATATCAAGAAGACAGTGAAACGACAGGTTCCGGAGATATCAGAGGCGGATCATCTCTTCTCCTTTGATGTGAAGCTATGCAATGGGAAAGTGGTGCACGTTGAAGCTTGCAGAAAGGGATTTTACAGTGTTGGAAAGCAGAGGATTTTTAATCATAACCTTGTTGATTTGTTAAGACGGCTTGGTAGAGCTTTTGATACCGCTTATGACGATCTTTTGAAAGCATTTTCAGAACGTAACAAGTTTGGGAATCTCCCTTATGGATTCAGAGCCAACACATGGCTTGTTCCTCCAGTTGCAGCGCACTCAACATCAGTTTTCCCTCCCCTGCCGGTGGAGGATGAAATTTGGGGAGGAAATGGTGGTGGTCGAGGAAGGGATGGACAATTTGATTTGATTCCTTGGGCCAGTGAGTTTTCATTTATTGCATCTATGCCTTGCAAAACAGCAGAAGAAAGACAAGTTCGTGATAGAAAAGCATTCCTTCTTCACACTCTATTTGTTGATGTTGCCATCTTCCAAGCGGTTGGGGCTGTTAAACATGTTATGGGAGAACCTGATTTAAGCTTCTCAGTTGCAGAAAATAGTATCCTTTACTCTGAGAGAGTAGGTGACTTGAATATTAGAGTCTGGAAAGATGCTTCTGTTGCCAACTGTAAAGTTGATACCAAAATTGATGGAGTTGAAGCTACTGGAGTAAATAAAAAGGATCTAATAGAGAGAAATCTGCTGAAAGGAATTACCGCTGATGAGAATACTGCAGCCCATGATATTAGCACTTTAGGTATTATTAATGTAAGATATTGTGGTTATGTGGTTATTGTGAAAGTTGAGGGTGGAGAAAATGAAAATGTCAACTTTTCATCTTATCAGAGTACTGAATTGTTTGATCAGCCAGAGGGTGGTGCCAATGCACTCAACATTAACAGTTTGAGACTACTTCTCAACTCAACACAGTCAGAGAAGAATAGACCAATGACTCAGATGCAAATCCCAGAGAGTGAAGAGCTTGGAGTTTCTCATGCTTTAGTGGAGAGGCTTATTAAAGAAAGCCTTGCTAAGCTTGAGGAAGAGGAACATGGCTTGGACAATTTCATAAGATGGGAACTGGGAGCATGCTGGATACAACATTTACAAGACCAAAACAATACAGAAAAAGATAAGAAACCATCTTTGGATAAGGCTAAAAATGAAATGAAAGTTGAGGGGCTGGGAAAACCCCTTAAAGCTCTCAAGAATAATAAAAATAAATCTGATCTAAGTAATGTGACATTGGCATCTGAAAACACCAAATCTCATCTGGTATTTGTTAGTGGAGAGCCTGAAAGTGCTCCATTTCCCTCAGTAGAATTGAAGCATGAAACAACAGCAGCAGAAGATGAGCTTGTGCTGAAGGGTATGTTATCTGAAGAAGCTTTCACTGGGTTAAAAGAAACAGGAACTGCACTTCACTGCAAGTCAATGCAAGATCTGATTGACTTGTCTCAGAAATATTACATGGACGTTGCTCTTCCAAAGCTGGTAGCAGATTTTGGCTCATTGGAACTCTCTCCCGTTGATGGACGTACCTTAACTGATTTTATGCATACAAGGGGTCTACGTATGCGTTCTCTTGGACATGTTGTCAAGCTTTCGGAAAAGCTATCACATGTACAATCACTTTGTATTAATGAGATGATAGTTCGGGCTTTCAAGCACATCCTGCAGGCAGTGATTGCTATTGTTGACAAGGAGAAAATGGCCACATCCATTGCTGGTGCATTAAATTTGCTGCTCGGTGTTCCTGAAAATAGAGAATTAGATAAATCAAGTAAAATGCACCCCATTGTATGGAAATGGCTTGAGATGTTTCTGAAGAAACGATTTGATTGGGATCTTAGTAGCTTGAATAATAATGATGTGAGGAAGTTTGCAATTTTACGTGGCTTATGTCATAAGGTTGGCATTGAGCTTGTTCCAAGGGATTTTGATATGGATTCTCCAATTCCCTTTCACAAATCTGATATTGTTAGCTTGGTCCCGGTTTACAAGCAAGCAGCATGCTCATCTGCAGATGGAAGACAGCTCTTAGAGTCATCAAAAACAGCTTTAGACAAAGGAAAGCTTGAAAATGCAGTTACCTATGGGACAAAGGCTCTTGCCAAGCTTGTAGCAGTTTGTGGCCCCTATCATCGGATGACAGCGGGAGCATACAGTTTACTTGCTGTAGTTTTATATCACACCGGAGACTTCAATCAGGCTACAATTTATCAACAGAAAGCTCTGGATATTAATGAGAGAGAGCTTGGTCTGGATCATCCAGATACTATGAAGAGTTATGGGGATCTTGCAGTTTTCTACTACCGACTTCAACACACAGAGCTGGCTCTGAAGTATGTAAAGCGTGCTTTATATCTTCTGCATCTAACCTGTGGCCCATCTCATCCCAACACTGCTGCAACATACATTAATGTGGCTATGATGGAGGAAGGTCTAGGAAATGTACATGTTGCTCTCAGATATCTTCACAAAGCTTTAAAGTGCAACCAAAGGTTACTTGGTCCAGATCATATTCAGACGGCTGCAAGTTATCATGCAATAGCAATAGCACTCTCATTGATGGAAGCATATCCTTTGAGTGTGCAGCATGAGCAAACAACTTTAAGAATTCTGCGGGCAAAACTTGGTCCAGATGACTTGCGAACACAGGATGCTGCTGCTTGGCTTGAGTATTTTGAGTCCAAGGCTTTTGAACAGCAAGAAGCTGCGCGAAATGGTACTCGAAAGCCTGATACATCAATTGCTAGCAAAGGCCACCTAAGTGTGTCGGATTTGCTGGACTACATTAATCCTAATCATGATCCTAAAGGGAGAGATGTTGCTGTAAAGAGAAGAAGCCAAATAACAAAGGTAAGGATGGAATCTGGCCAGAATGTTGGCTCAGCAACTTCTGACGAGTCTTCAAAAGAAAGTTCAAGAGAGGCTTCAGATGAAGAAGTACTTATACCTGGACCAGGTGATAATGCAGATGCTGAGCTGGAGACCAAATCAGCATCTGATTCAGAACATCCGATTTTAGAAAAAACCTCCAATGAAGAGCAACAAATTTCAGGTGAAATCTCATCTGAAGCACATGCTGATGGAGAGGATGGATGGCAACCAGTTCAGCGGCCAAGATCATCTGGTTCAAATGGCCAGCGACTGAAGCAGCGAAGGGCAACAATTGGCAAAGTTTATTATCAGAAGAAGAACGTTGAGTCTGACATAGACTATCCATGTGTAAGGAGTAGTGATCAGAACAATAGGTATTACTTTGTGAAGAAGAGAACAATATCCCATGGGGTTTATGCAGATAATTATACTGTAAGCAAATCCCAAGGTACTAAATTTGGAAGGAAAGTGGTCAAAGCTGTTACATACAAGGTCAAGTCCATGTCTGCATCTGATAAGATTACTGCAAAGGATCCATCAGAAGTTGGTGACAAACTATACAGTTCTTATTCACAACATGGGTCAGATTTGTCACAGAATGATATCAATCCAGTAAAGACTTCTATAGTTAGTCTTTGGAAATCTCCTTCATACAAGGAAGTAGCAGTGGCTCCTCCTGGGACAATTTCCAAGTTGCAAGTCTATAATACTCAAAACGAGATTCCTGTTAGCCATGAATATGATGTAGGAAAACATGGAGAGGAAGATAATAAAGCATATGCAAATGCTTACCCAACCCTAGAAGAGGTTAGCGATACATTAAATGAAAAGGACAATGATTCTTTTCCAGATTCTGTTGATGATTCACAAGATAGTATAGTTTCTGAGAAGAAAGAGATGCAGTTTACTGATGCTGTGCAAGACAATTTTGAGAGTGATAAGGGGGTTGAATCTGTGGATGTTGAGGTTCATGAAGCAAGTAATAATATTTTAATGATTGATCCAGCGGAGGATCCTGTGGATTCTCACAAACTAGAACTTGACACAAGTAGCTCTGACTGTTTTGAATTCCCCATTCATACAAATGCCATCTCACAAGAAGGTGAAGATTTAAGAGTTAGTGTATCTACGTCAAATCAGGGTGATGCCCAGGGCATCCCATGTAAGAAGTTATCTGCATCTGCAGCTCCATTCAACCCGTCACCAGGCATTGCACGTGCTGCACCAGTTGCTGTGAATACAACTCTTCCTTCTGCTGCTGGTGCTGTTCCACCGATTGGCCCCTGGCCATTAAATATGAATGTTCACCATGGACCTGCTACAGTGTTACCTGCAGTTACCCCAATGTGTTCCTCGCCTCACCATGCATACCCATCACCTCCACCATCACCAAATATGATACAGCCATTGCCATTTATCTATCCTCCTTATACCCAACCTCAATCAATACCATCTAACAACTTTCCAGTAACTACCAGTGCATTTCATGTCAATCAGTTCACATGGCAATGTGGTATGAACCCAACTGTATCTAATTTTGGTCCCAATGCTGTCTGGCCTGGTTGTTGTCCTGTGGAATTCCCTCTTCCAGCACCTGTCATCAAACCAATCCCTGATCCCATTTTGGAGCCACAAAAACAGTGTCATGTTTCTAAAAATTCAAGTTCAGCTTTTGTTCTGCCAGAGGGCATTAGTAATGTCATTGAAATTAAGAAACAGGTGGAAGCCTTAGAATCAGAGACCAGTGAAGATGAAGTGAGTAGAGTTCATTCAGAAAGTGTAAAGGAAAATGGTAACCCTAATTTTCATGAGTCTGAAAATGCTGAGATCAAATCAAATCATAACATTGGTTTGAATAACAACACTAGCAGAAGTGAAAAGAACATGGATGGTGAGAAAACCTTAAGCATTTTGATTAGGGGAAGAAGAAACCGAAAGCAGACGCTAAGAATGCCAATAAGTTTGCTAACTAAACCTAATGGCTCGCAGTCATTTAAAGTTATTTATAACCGCGTAGTCAGAGGAAGTGATGCTCCCAAATCCATCAACTTGTCTTCTAGAAAAGATTGTACAGCTACTGCTTAA 5505 0.4193 MAPRNSRGKGKGEKKKKEEKVLPVVMDITVNLSDGTHVILKGISTDRIIDIRRLLSVNVETCHITNFSLSHEVRGQQLKDPVDVFALKPCVLTLNEEDYDEDRAVAHVRRLLDIVACATNLGHSPAAKNGNSQTAATEVVDGDSEISHSCPRLGSFYEFFSLSHLTPPLQYIKKTVKRQVPEISEADHLFSFDVKLCNGKVVHVEACRKGFYSVGKQRIFNHNLVDLLRRLGRAFDTAYDDLLKAFSERNKFGNLPYGFRANTWLVPPVAAHSTSVFPPLPVEDEIWGGNGGGRGRDGQFDLIPWASEFSFIASMPCKTAEERQVRDRKAFLLHTLFVDVAIFQAVGAVKHVMGEPDLSFSVAENSILYSERVGDLNIRVWKDASVANCKVDTKIDGVEATGVNKKDLIERNLLKGITADENTAAHDISTLGIINVRYCGYVVIVKVEGGENENVNFSSYQSTELFDQPEGGANALNINSLRLLLNSTQSEKNRPMTQMQIPESEELGVSHALVERLIKESLAKLEEEEHGLDNFIRWELGACWIQHLQDQNNTEKDKKPSLDKAKNEMKVEGLGKPLKALKNNKNKSDLSNVTLASENTKSHLVFVSGEPESAPFPSVELKHETTAAEDELVLKGMLSEEAFTGLKETGTALHCKSMQDLIDLSQKYYMDVALPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGHVVKLSEKLSHVQSLCINEMIVRAFKHILQAVIAIVDKEKMATSIAGALNLLLGVPENRELDKSSKMHPIVWKWLEMFLKKRFDWDLSSLNNNDVRKFAILRGLCHKVGIELVPRDFDMDSPIPFHKSDIVSLVPVYKQAACSSADGRQLLESSKTALDKGKLENAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLRILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDTSIASKGHLSVSDLLDYINPNHDPKGRDVAVKRRSQITKVRMESGQNVGSATSDESSKESSREASDEEVLIPGPGDNADAELETKSASDSEHPILEKTSNEEQQISGEISSEAHADGEDGWQPVQRPRSSGSNGQRLKQRRATIGKVYYQKKNVESDIDYPCVRSSDQNNRYYFVKKRTISHGVYADNYTVSKSQGTKFGRKVVKAVTYKVKSMSASDKITAKDPSEVGDKLYSSYSQHGSDLSQNDINPVKTSIVSLWKSPSYKEVAVAPPGTISKLQVYNTQNEIPVSHEYDVGKHGEEDNKAYANAYPTLEEVSDTLNEKDNDSFPDSVDDSQDSIVSEKKEMQFTDAVQDNFESDKGVESVDVEVHEASNNILMIDPAEDPVDSHKLELDTSSSDCFEFPIHTNAISQEGEDLRVSVSTSNQGDAQGIPCKKLSASAAPFNPSPGIARAAPVAVNTTLPSAAGAVPPIGPWPLNMNVHHGPATVLPAVTPMCSSPHHAYPSPPPSPNMIQPLPFIYPPYTQPQSIPSNNFPVTTSAFHVNQFTWQCGMNPTVSNFGPNAVWPGCCPVEFPLPAPVIKPIPDPILEPQKQCHVSKNSSSAFVLPEGISNVIEIKKQVEALESETSEDEVSRVHSESVKENGNPNFHESENAEIKSNHNIGLNNNTSRSEKNMDGEKTLSILIRGRRNRKQTLRMPISLLTKPNGSQSFKVIYNRVVRGSDAPKSINLSSRKDCTATA* 1835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0922 1834 MobiDBLite consensus disorder prediction 1219 1233 - -
Apr4g0922 1834 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 1816 - -
Apr4g0922 1834 Pfam Mitochondrial function, CLU-N-term 45 115 IPR028275 -
Apr4g0922 1834 MobiDBLite consensus disorder prediction 1133 1237 - -
Apr4g0922 1834 ProSiteProfiles Clueless (Clu) domain profile. 283 559 IPR025697 -
Apr4g0922 1834 SUPERFAMILY TPR-like 863 1046 IPR011990 GO:0005515
Apr4g0922 1834 SMART tpr_5 898 931 IPR019734 GO:0005515
Apr4g0922 1834 SMART tpr_5 940 973 IPR019734 GO:0005515
Apr4g0922 1834 SMART tpr_5 982 1015 IPR019734 GO:0005515
Apr4g0922 1834 MobiDBLite consensus disorder prediction 1733 1765 - -
Apr4g0922 1834 MobiDBLite consensus disorder prediction 1176 1192 - -
Apr4g0922 1834 MobiDBLite consensus disorder prediction 1134 1149 - -
Apr4g0922 1834 MobiDBLite consensus disorder prediction 1717 1732 - -
Apr4g0922 1834 CDD CLU-central 688 828 IPR033646 -
Apr4g0922 1834 Pfam Translation initiation factor eIF3 subunit 135 686 827 IPR033646 -
Apr4g0922 1834 MobiDBLite consensus disorder prediction 1717 1771 - -
Apr4g0922 1834 Pfam Tetratricopeptide repeat 897 967 - -
Apr4g0922 1834 Pfam Tetratricopeptide repeat 981 1055 - -
Apr4g0922 1834 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 1816 IPR027523 GO:0006996
Apr4g0922 1834 Gene3D Tetratricopeptide repeat domain 852 1102 IPR011990 GO:0005515
Apr4g0922 1834 ProSiteProfiles TPR repeat profile. 898 931 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0922 Apr-Chr4 7479078 7492924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0922 K03255 - gmx:100784117 2607.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0922 4 7479078 7492924 Apr4g0922 4 7479078 7492924 ECH
Apr4g0922 4 7479078 7492924 Apr10g1220 10 24553539 24568065 PCT