Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0907 ATGAGACAAGAAATAAGAAATAACTTACTACTGGGCCTCTGTTTGTCCTGTTCTTATGATAACTCCAGTTGGAGGGCCGTGAGGATGTTGGAGAAAGTGGAGGAGTTTAACATGGACAAAGTTATACAAGAGTTTGAGACACTGACAAAGGATGCGGAAAGGGTTCAGAAGGAAACGCTCAAAAGGATTTTGGAGGATAACGCATCAGCTGAATATTTGCAGAATTTGGGTCTCAATGGAAGAACTGACCCCGAGAGTTTCAAGGCCTGTGTTCCTCTGGTTACCCACCAAGAATTGGAGCCTTATATCTATAGAATTATTGATGGCGATGCTTCTCCTATTCTCACTGGAAAACCCATCACCACCATGTCTTTAAGTTCTGGCACTACCCAGGGGAAGCCAAAATACGTACCATGGAATGATGAATTGTTTGAAACCACAATGCAGATATATCAGACCTCTTTTGCCTTTAGAAACAAAGAGTTTCCTATCACAAACGGTAAGGCTTTAAGCTTCATATACGGTAGCAAACAGTTCAAAACAAAAGGGGGTCTGGCAGCTAGAACTGCTACAAGCAATGTGTTCCGCAGTGCAGGTTACAAATGTGGAATGAGGGCACTTCAATCCCAATGCTGCAGCCCTGATGAAGTGATATTTGGTCCTGATTTTTTCCAATCATTATATTGCCATCTATTGTGTGGACTGATTTTCCGTGAGGAAGTTCAGTTTGTGTCTTCCACATTTGCACATAGCATTGTCCATGCTTTTAGAACCTTTGAAGAAGTGTGGGAGGATCTGTGTACTGATATCAGAGAAGGGGTTCTCAATAACAATGTCACGGTTCCATCCATTCGAATGGCTATGTCTAAGCTGCTCAAACCAAACCCAGAATTAGCCAACCTGATCCACAATAAATGTGTGGGATTGAGCAACTGGTATGGGTTGATACCAGAGCTTTTTCCCAATGCTAAGTATATTTATGGCATCATGACTGGGTCGATGGAGCCTTATTTGAAAAAGTTGAGGCACTATGCTGGGGAGTTGCCTTTGTTGACTGCTGACTATGGATCTTCTGAAGGATGGATTGCAGCAAATGTGAACCCAACACTCCCTCCTGAATCTGCCACTTATGCTGTGCTTCCTCACATCGGTTACTTTGAATTCATTCCTCTCACAGACCTTGAGAATGCCAAGGGAGATTTCCTCTCTATTGATCCTCAGCCAGTGGGCCTCACTGAAGTCAAGGTTGATCAAGAGTATGAAATTGTTATGACCAATCCAGCAGGTTTATACCGTTATAGGCTAGGGGATGTGGTGAAGGTTATGGGATTCAACAATTCAACTCCAGAACTAAAGTTTATTCGGCGAAGCAGTCTTCTACTGAACATTAACATTGACAAGAACACAGAGAAGGATCTACAGATAGCTGTGGAAGAAGCAGCGAAATTGTTAGCAGAGGAGAAAATGGAAGTGGTTGATTTCACTAGCCATGTTGATATATCAAAAGAACCAGGGCACTATGTCATATTCTGGGAGCTAAGTGGGGAAGCAAGTGAAGAAGTACTTGGAGAATGCTGCAATTGTTTGGACAAGTCTTTTGTTGATGCAGGCTACACCAGTTCTCGCAAAGTCAACTGCATTGGGGCCCTTGAACTCCGAGTTGTAAGGAGGGGAACATTCCAGAAGATTCTTGATCATTACCTAGGACTAGGAACCGCTGTTAGTCAGTACAAGACACCAAGATGTGTAGGTCCTACAAACATCAAAGTGTTGCAAATCTTGAGTGAAAATGTTGTGAAGAACTATCTCAGTACTGCTTTCAATTGA 1827 0.4275 MRQEIRNNLLLGLCLSCSYDNSSWRAVRMLEKVEEFNMDKVIQEFETLTKDAERVQKETLKRILEDNASAEYLQNLGLNGRTDPESFKACVPLVTHQELEPYIYRIIDGDASPILTGKPITTMSLSSGTTQGKPKYVPWNDELFETTMQIYQTSFAFRNKEFPITNGKALSFIYGSKQFKTKGGLAARTATSNVFRSAGYKCGMRALQSQCCSPDEVIFGPDFFQSLYCHLLCGLIFREEVQFVSSTFAHSIVHAFRTFEEVWEDLCTDIREGVLNNNVTVPSIRMAMSKLLKPNPELANLIHNKCVGLSNWYGLIPELFPNAKYIYGIMTGSMEPYLKKLRHYAGELPLLTADYGSSEGWIAANVNPTLPPESATYAVLPHIGYFEFIPLTDLENAKGDFLSIDPQPVGLTEVKVDQEYEIVMTNPAGLYRYRLGDVVKVMGFNNSTPELKFIRRSSLLLNINIDKNTEKDLQIAVEEAAKLLAEEKMEVVDFTSHVDISKEPGHYVIFWELSGEASEEVLGECCNCLDKSFVDAGYTSSRKVNCIGALELRVVRRGTFQKILDHYLGLGTAVSQYKTPRCVGPTNIKVLQILSENVVKNYLSTAFN* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0907 608 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 29 608 - -
Apr4g0907 608 Coils Coil 38 58 - -
Apr4g0907 608 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 29 608 IPR004993 -
Apr4g0907 608 Pfam GH3 auxin-responsive promoter 44 583 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0907 Apr-Chr4 7289275 7294501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0907 42 605 EF-hand Containing Proteins AT1G23160 39.206 8.26e-136 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0907 K14506 - gmx:100794598 1070.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0907 4 7289275 7294501 Apr4g0907 4 7289275 7294501 ECH
Apr4g0907 4 7289275 7294501 Apr10g1242 10 24816174 24821319 PCT