Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0893 ATGGCGGCGGCAACAACCACTGTATTAGTTCCTCCTCTTTTGACACGCACCAAAGTCACCCGCTGCTCTGATTTTCCAACACTCTCTCCTCGCCCTCGCTCTTCTTCTTCCCCTTTCCGTCAAAATCACTTTATTCTTTCAGAAAATCGAAAGATTTCTCAGCTTCTGACCCGGGCTTCTTCAGAGGAAACATCTACTTCTGTAGATGCTAGCGAGTTGTTTACAGATTTGAAACAGAAGTGGGATGCTCTTGAAAACAAGTCTACAGTGCTTCTATATGGTGGTGGGGCTATTGTTGCTCTTTGGTTATCTTCAATTCTTGTTGGTGCCATCAACTCAGTTCCCTTGCTTCCAAAGATTATGGAGTTGGTAGGACTAGGGTACACTGGATGGTTTGTCTATCGATACCTTCTGTTCAAGTCTAGCAGAAAGGAACTAGCTACAGACATTGAGGCACTGAAAAAGAAAATTTCCGAAACTGAATAG 486 0.4383 MAAATTTVLVPPLLTRTKVTRCSDFPTLSPRPRSSSSPFRQNHFILSENRKISQLLTRASSEETSTSVDASELFTDLKQKWDALENKSTVLLYGGGAIVALWLSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKISETE* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0893 161 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 76 157 IPR025564 -
Apr4g0893 161 Coils Coil 143 161 - -
Apr4g0893 161 PANTHER - 3 161 IPR033344 GO:0009579
Apr4g0893 161 PANTHER MEMBRANE PHOSPHOPROTEIN 14 KDA, CHLOROPLAST, PUTATIVE-RELATED 3 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0893 Apr-Chr4 7191572 7193218 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0893 - - zju:107423741 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0893 4 7191572 7193218 Apr4g0893 4 7191572 7193218 ECH
Apr10g1266 10 25008081 25011031 Apr4g0893 4 7191572 7193218 ECH