Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1266 ATGGCAGCAGCAGCAGCAGCCACGGTGCTACTCCCACATAGGATTTCGACCACCAACAACGTTGCCCGTTGCTCTGCTTTGCCTTCTCTGCCACCGCGCTTCTCCACCACCACCCCTTTGTCTTCAGCTTCCCTCAAACACGTTTTAGTGTCCCGAAAACCTTCTCTGCTTCAGACCAGAGCTTCTTCTGAGGAAACATCTTCAGTGGATGCTAATGAATTGTTCACAGATTTGAAGCAAAAGTGGGATGCTGTTGAAAACAAGTCCACAGTACTTCTTTATGGTGGTGGAGCTATTGTTGCTGTTTGGCTATCTTCAATTCTTGTTAGTGCCATCAACTCGGTTCCTTTGCTTCCAAAGATTATGGAGTTGGTAGGGCTAGGATACACTGGATGGTTTGTCTACCGATACCTTCTGTTTAAGTCTAGCAGGAAGGAGCTAGCTACAGACATCGAATCTCTGAAGAAGAAAATTACTGGAACTGAATAG 489 0.4642 MAAAAAATVLLPHRISTTNNVARCSALPSLPPRFSTTTPLSSASLKHVLVSRKPSLLQTRASSEETSSVDANELFTDLKQKWDAVENKSTVLLYGGGAIVAVWLSSILVSAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKITGTE* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1266 162 PANTHER - 4 162 IPR033344 GO:0009579
Apr10g1266 162 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 77 160 IPR025564 -
Apr10g1266 162 PANTHER MEMBRANE PHOSPHOPROTEIN 14 KDA, CHLOROPLAST, PUTATIVE-RELATED 4 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1266 Apr-Chr10 25008081 25011031 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1266 - - gmx:100305578 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1266 10 25008081 25011031 Apr10g1266 10 25008081 25011031 ECH
Apr10g1266 10 25008081 25011031 Apr4g0893 4 7191572 7193218 ECH